Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC3.64□□□□□ -1.83
Ddb1Q3U1J4 Gm23716-201ENSMUST00000157348 144 ntBASIC3.64□□□□□ -1.83
Ddb1Q3U1J4 Gm26928-201ENSMUST00000182674 572 ntBASIC3.64□□□□□ -1.83
Ddb1Q3U1J4 Gm27694-201ENSMUST00000184740 86 ntBASIC3.64□□□□□ -1.83
Ddb1Q3U1J4 Gm18357-201ENSMUST00000188184 580 ntBASIC3.64□□□□□ -1.83
Ddb1Q3U1J4 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.64□□□□□ -1.83
Ddb1Q3U1J4 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.64□□□□□ -1.83
Ddb1Q3U1J4 AC165092.3-201ENSMUST00000223602 282 ntBASIC3.64□□□□□ -1.83
Ddb1Q3U1J4 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.64□□□□□ -1.83
Ddb1Q3U1J4 Gm26457-201ENSMUST00000082678 78 ntBASIC3.64□□□□□ -1.83
Ddb1Q3U1J4 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.64□□□□□ -1.83
Ddb1Q3U1J4 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ddb1Q3U1J4 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ddb1Q3U1J4 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Ddb1Q3U1J4 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
Ddb1Q3U1J4 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.63□□□□□ -1.83
Ddb1Q3U1J4 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.63□□□□□ -1.83
Ddb1Q3U1J4 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Ddb1Q3U1J4 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC3.63□□□□□ -1.83
Ddb1Q3U1J4 Gm22779-201ENSMUST00000104085 107 ntBASIC3.63□□□□□ -1.83
Ddb1Q3U1J4 Gm11388-201ENSMUST00000120908 159 ntBASIC3.63□□□□□ -1.83
Ddb1Q3U1J4 Gm14298-201ENSMUST00000139032 237 ntBASIC3.63□□□□□ -1.83
Ddb1Q3U1J4 Gm16356-201ENSMUST00000143300 169 ntBASIC3.63□□□□□ -1.83
Ddb1Q3U1J4 Gm25863-201ENSMUST00000158249 329 ntBASIC3.63□□□□□ -1.83
Ddb1Q3U1J4 Gm22839-201ENSMUST00000158436 304 ntBASIC3.63□□□□□ -1.83
Ddb1Q3U1J4 Gm23581-201ENSMUST00000158531 63 ntBASIC3.63□□□□□ -1.83
Ddb1Q3U1J4 Gm28288-201ENSMUST00000191019 214 ntBASIC3.63□□□□□ -1.83
Ddb1Q3U1J4 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.63□□□□□ -1.83
Ddb1Q3U1J4 Gm35931-201ENSMUST00000203931 448 ntBASIC3.63□□□□□ -1.83
Ddb1Q3U1J4 AC133156.1-202ENSMUST00000227284 363 ntBASIC3.63□□□□□ -1.83
Ddb1Q3U1J4 Gm25856-201ENSMUST00000082786 75 ntBASIC3.63□□□□□ -1.83
Ddb1Q3U1J4 Gm23517-201ENSMUST00000082830 192 ntBASIC3.63□□□□□ -1.83
Ddb1Q3U1J4 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ddb1Q3U1J4 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Ddb1Q3U1J4 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Gm23941-201ENSMUST00000101953 107 ntBASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Gm15896-201ENSMUST00000118045 440 ntBASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Gm11819-201ENSMUST00000122192 372 ntBASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Gm26256-201ENSMUST00000122499 186 ntBASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Gm22598-201ENSMUST00000157600 127 ntBASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Gm24291-201ENSMUST00000157633 162 ntBASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Gm22651-201ENSMUST00000157872 94 ntBASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Gm23760-201ENSMUST00000158350 116 ntBASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Gm28000-201ENSMUST00000184380 85 ntBASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Mir6371-201ENSMUST00000184470 111 ntBASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Gm20257-202ENSMUST00000188643 130 ntBASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Gm43914-201ENSMUST00000203592 594 ntBASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Gm45678-201ENSMUST00000210509 295 ntBASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Mir208a-201ENSMUST00000083498 83 ntBASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Ddb1Q3U1J4 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ddb1Q3U1J4 Mir682-201ENSMUST00000102281 96 ntBASIC3.61□□□□□ -1.83
Ddb1Q3U1J4 Gm24172-201ENSMUST00000104127 117 ntBASIC3.61□□□□□ -1.83
Ddb1Q3U1J4 Gm11935-201ENSMUST00000118608 399 ntBASIC3.61□□□□□ -1.83
Ddb1Q3U1J4 Gm13541-201ENSMUST00000119519 283 ntBASIC3.61□□□□□ -1.83
Ddb1Q3U1J4 Gm24997-201ENSMUST00000157910 105 ntBASIC3.61□□□□□ -1.83
Ddb1Q3U1J4 Gm16584-201ENSMUST00000159267 189 ntBASIC3.61□□□□□ -1.83
Ddb1Q3U1J4 Mir5136-201ENSMUST00000175573 76 ntBASIC3.61□□□□□ -1.83
Ddb1Q3U1J4 Gm38238-201ENSMUST00000194334 346 ntBASIC3.61□□□□□ -1.83
Ddb1Q3U1J4 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.61□□□□□ -1.83
Ddb1Q3U1J4 Gm6796-201ENSMUST00000211919 243 ntBASIC3.61□□□□□ -1.83
Ddb1Q3U1J4 LOC667541-201ENSMUST00000223408 278 ntBASIC3.61□□□□□ -1.83
Ddb1Q3U1J4 Gm22622-201ENSMUST00000082870 129 ntBASIC3.61□□□□□ -1.83
Ddb1Q3U1J4 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ddb1Q3U1J4 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.61□□□□□ -1.83
Ddb1Q3U1J4 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Ddb1Q3U1J4 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ddb1Q3U1J4 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Mir499-201ENSMUST00000102357 79 ntBASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Gm12646-201ENSMUST00000119144 238 ntBASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Gm15272-201ENSMUST00000120865 233 ntBASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Mir1942-201ENSMUST00000157274 63 ntBASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Mir3075-201ENSMUST00000175340 85 ntBASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Gm29397-201ENSMUST00000185205 333 ntBASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Gm1833-201ENSMUST00000191608 682 ntBASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Gm37417-201ENSMUST00000195257 454 ntBASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Gm19177-201ENSMUST00000204520 613 ntBASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Gm8940-201ENSMUST00000212585 219 ntBASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 AL606472.1-201ENSMUST00000224628 275 ntBASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Gm23451-201ENSMUST00000083328 122 ntBASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Gm23041-201ENSMUST00000083868 106 ntBASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Mir127-201ENSMUST00000093568 70 ntBASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
Ddb1Q3U1J4 Gm37096-201ENSMUST00000192317 2058 ntBASIC3.59□□□□□ -1.83
Ddb1Q3U1J4 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ddb1Q3U1J4 Gm15215-201ENSMUST00000117773 489 ntBASIC3.59□□□□□ -1.83
Ddb1Q3U1J4 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 398.5 ms