Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm24666-201ENSMUST00000158937 167 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm20399-201ENSMUST00000174652 132 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm25020-201ENSMUST00000178071 107 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm25457-201ENSMUST00000179509 107 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm22756-201ENSMUST00000180118 107 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm7909-201ENSMUST00000182688 614 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm27828-201ENSMUST00000184108 119 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm19503-201ENSMUST00000187109 241 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm44320-201ENSMUST00000199276 86 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm44703-201ENSMUST00000205724 248 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm45031-201ENSMUST00000206800 288 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm40810-201ENSMUST00000219149 253 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm26054-201ENSMUST00000083037 107 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Mir30e-201ENSMUST00000083475 92 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm24492-201ENSMUST00000083798 107 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.16□□□□□ -1.9
Col8a1Q00780 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col8a1Q00780 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col8a1Q00780 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
Col8a1Q00780 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Col8a1Q00780 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Col8a1Q00780 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Col8a1Q00780 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Col8a1Q00780 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Col8a1Q00780 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Col8a1Q00780 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Col8a1Q00780 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Col8a1Q00780 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Col8a1Q00780 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.15□□□□□ -1.9
Col8a1Q00780 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Col8a1Q00780 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Col8a1Q00780 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Col8a1Q00780 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.15□□□□□ -1.91
Col8a1Q00780 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Col8a1Q00780 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Col8a1Q00780 Gm15282-201ENSMUST00000117707 300 ntBASIC3.15□□□□□ -1.91
Col8a1Q00780 Gm11471-201ENSMUST00000121824 198 ntBASIC3.15□□□□□ -1.91
Col8a1Q00780 Gm26476-201ENSMUST00000122618 313 ntBASIC3.15□□□□□ -1.91
Col8a1Q00780 Gm22966-201ENSMUST00000157957 129 ntBASIC3.15□□□□□ -1.91
Col8a1Q00780 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.15□□□□□ -1.91
Col8a1Q00780 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Col8a1Q00780 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.15□□□□□ -1.91
Col8a1Q00780 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.15□□□□□ -1.91
Col8a1Q00780 Gm44519-201ENSMUST00000206486 122 ntBASIC3.15□□□□□ -1.91
Col8a1Q00780 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.15□□□□□ -1.91
Col8a1Q00780 Gm22247-201ENSMUST00000082476 131 ntBASIC3.15□□□□□ -1.91
Col8a1Q00780 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.15□□□□□ -1.91
Col8a1Q00780 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Col8a1Q00780 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.15□□□□□ -1.91
Col8a1Q00780 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Col8a1Q00780 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.15□□□□□ -1.91
Col8a1Q00780 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Col8a1Q00780 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col8a1Q00780 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col8a1Q00780 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm25539-201ENSMUST00000116886 122 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm16021-201ENSMUST00000121176 219 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm23586-201ENSMUST00000157657 123 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm27592-201ENSMUST00000157729 126 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm24726-201ENSMUST00000158232 121 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm22174-201ENSMUST00000175050 125 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm22692-201ENSMUST00000175055 125 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm27634-201ENSMUST00000175060 126 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm26460-201ENSMUST00000175061 126 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm22460-201ENSMUST00000175269 124 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm24365-201ENSMUST00000175384 125 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm44310-201ENSMUST00000175424 126 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm22639-201ENSMUST00000175591 125 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm24979-201ENSMUST00000178626 126 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm27743-201ENSMUST00000185136 126 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm28282-201ENSMUST00000186072 186 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm37923-201ENSMUST00000191624 161 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm42774-201ENSMUST00000198854 283 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm19244-201ENSMUST00000204340 253 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm18502-201ENSMUST00000218679 199 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm18617-201ENSMUST00000222311 259 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col8a1Q00780 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col8a1Q00780 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Col8a1Q00780 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.14□□□□□ -1.91
Col8a1Q00780 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Col8a1Q00780 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.13□□□□□ -1.91
Col8a1Q00780 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Col8a1Q00780 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col8a1Q00780 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col8a1Q00780 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Col8a1Q00780 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 109.5 ms