Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm12393-201ENSMUST00000117084 848 ntBASIC1.49□□□□□ -2.17
Trim43bP86448 Gm14674-201ENSMUST00000117816 342 ntBASIC1.49□□□□□ -2.17
Trim43bP86448 Gm14215-201ENSMUST00000120578 221 ntBASIC1.49□□□□□ -2.17
Trim43bP86448 Gm24997-201ENSMUST00000157910 105 ntBASIC1.49□□□□□ -2.17
Trim43bP86448 Gm24348-201ENSMUST00000158710 130 ntBASIC1.49□□□□□ -2.17
Trim43bP86448 Gm15914-201ENSMUST00000161922 309 ntBASIC1.49□□□□□ -2.17
Trim43bP86448 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC1.49□□□□□ -2.17
Trim43bP86448 Gm18417-201ENSMUST00000176564 648 ntBASIC1.49□□□□□ -2.17
Trim43bP86448 Gm21978-201ENSMUST00000179696 377 ntBASIC1.49□□□□□ -2.17
Trim43bP86448 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
Trim43bP86448 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.49□□□□□ -2.17
Trim43bP86448 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.49□□□□□ -2.17
Trim43bP86448 AC167192.4-201ENSMUST00000224087 993 ntBASIC1.49□□□□□ -2.17
Trim43bP86448 Gm16976-205ENSMUST00000227324 226 ntBASIC1.49□□□□□ -2.17
Trim43bP86448 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC1.49□□□□□ -2.17
Trim43bP86448 Gm23377-201ENSMUST00000082943 126 ntBASIC1.49□□□□□ -2.17
Trim43bP86448 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Trim43bP86448 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Trim43bP86448 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Trim43bP86448 Gm20541-201ENSMUST00000173035 1406 ntBASIC1.49□□□□□ -2.17
Trim43bP86448 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.48□□□□□ -2.17
Trim43bP86448 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Trim43bP86448 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Trim43bP86448 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
Trim43bP86448 Gm14887-201ENSMUST00000119522 663 ntBASIC1.48□□□□□ -2.17
Trim43bP86448 Gm23429-201ENSMUST00000122486 149 ntBASIC1.48□□□□□ -2.17
Trim43bP86448 Gm22082-201ENSMUST00000157587 161 ntBASIC1.48□□□□□ -2.17
Trim43bP86448 Gm25454-201ENSMUST00000157947 315 ntBASIC1.48□□□□□ -2.17
Trim43bP86448 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC1.48□□□□□ -2.17
Trim43bP86448 Gm20543-201ENSMUST00000174200 726 ntBASIC1.48□□□□□ -2.17
Trim43bP86448 Gm23619-201ENSMUST00000178411 94 ntBASIC1.48□□□□□ -2.17
Trim43bP86448 Gm22862-201ENSMUST00000178593 121 ntBASIC1.48□□□□□ -2.17
Trim43bP86448 Gm25474-201ENSMUST00000179052 94 ntBASIC1.48□□□□□ -2.17
Trim43bP86448 Gm22047-201ENSMUST00000179176 94 ntBASIC1.48□□□□□ -2.17
Trim43bP86448 Gm28794-201ENSMUST00000185276 136 ntBASIC1.48□□□□□ -2.17
Trim43bP86448 AC170810.3-201ENSMUST00000226177 374 ntBASIC1.48□□□□□ -2.17
Trim43bP86448 AC166344.2-201ENSMUST00000226747 374 ntBASIC1.48□□□□□ -2.17
Trim43bP86448 Gm26328-201ENSMUST00000082821 107 ntBASIC1.48□□□□□ -2.17
Trim43bP86448 Gm26263-201ENSMUST00000083281 164 ntBASIC1.48□□□□□ -2.17
Trim43bP86448 Gm25794-201ENSMUST00000083286 107 ntBASIC1.48□□□□□ -2.17
Trim43bP86448 Gm24490-201ENSMUST00000083803 98 ntBASIC1.48□□□□□ -2.17
Trim43bP86448 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.48□□□□□ -2.17
Trim43bP86448 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.48□□□□□ -2.17
Trim43bP86448 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Trim43bP86448 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC1.47□□□□□ -2.17
Trim43bP86448 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC1.47□□□□□ -2.17
Trim43bP86448 Gm25109-201ENSMUST00000122474 114 ntBASIC1.47□□□□□ -2.17
Trim43bP86448 Gm24902-201ENSMUST00000158126 123 ntBASIC1.47□□□□□ -2.17
Trim43bP86448 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.47□□□□□ -2.17
Trim43bP86448 Gm3111-201ENSMUST00000167426 490 ntBASIC1.47□□□□□ -2.17
Trim43bP86448 Mir3086-201ENSMUST00000175072 87 ntBASIC1.47□□□□□ -2.17
Trim43bP86448 Gm42925-201ENSMUST00000197359 285 ntBASIC1.47□□□□□ -2.17
Trim43bP86448 Gm25820-201ENSMUST00000198589 127 ntBASIC1.47□□□□□ -2.17
Trim43bP86448 Gm43529-201ENSMUST00000199178 412 ntBASIC1.47□□□□□ -2.17
Trim43bP86448 Gm31230-201ENSMUST00000199725 785 ntBASIC1.47□□□□□ -2.17
Trim43bP86448 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Trim43bP86448 Gm45071-201ENSMUST00000205353 571 ntBASIC1.47□□□□□ -2.17
Trim43bP86448 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.47□□□□□ -2.17
Trim43bP86448 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Trim43bP86448 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.47□□□□□ -2.17
Trim43bP86448 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.47□□□□□ -2.17
Trim43bP86448 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.47□□□□□ -2.17
Trim43bP86448 Gm24805-201ENSMUST00000082931 104 ntBASIC1.47□□□□□ -2.17
Trim43bP86448 Gm26265-201ENSMUST00000083277 135 ntBASIC1.47□□□□□ -2.17
Trim43bP86448 Mir29c-201ENSMUST00000083614 88 ntBASIC1.47□□□□□ -2.17
Trim43bP86448 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.47□□□□□ -2.17
Trim43bP86448 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Trim43bP86448 Gm381-201ENSMUST00000117443 2037 ntBASIC1.47□□□□□ -2.17
Trim43bP86448 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
Trim43bP86448 Gm13885-201ENSMUST00000117569 187 ntBASIC1.46□□□□□ -2.18
Trim43bP86448 Gm14551-201ENSMUST00000120802 256 ntBASIC1.46□□□□□ -2.18
Trim43bP86448 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC1.46□□□□□ -2.18
Trim43bP86448 Gm25958-201ENSMUST00000175114 71 ntBASIC1.46□□□□□ -2.18
Trim43bP86448 Gm25020-201ENSMUST00000178071 107 ntBASIC1.46□□□□□ -2.18
Trim43bP86448 Gm27878-201ENSMUST00000184000 106 ntBASIC1.46□□□□□ -2.18
Trim43bP86448 Gm38280-201ENSMUST00000192610 158 ntBASIC1.46□□□□□ -2.18
Trim43bP86448 Gm38333-201ENSMUST00000193608 604 ntBASIC1.46□□□□□ -2.18
Trim43bP86448 Gm17771-201ENSMUST00000194477 1147 ntBASIC1.46□□□□□ -2.18
Trim43bP86448 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.46□□□□□ -2.18
Trim43bP86448 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.46□□□□□ -2.18
Trim43bP86448 AC156560.1-201ENSMUST00000221425 256 ntBASIC1.46□□□□□ -2.18
Trim43bP86448 AC162934.3-201ENSMUST00000223015 841 ntBASIC1.46□□□□□ -2.18
Trim43bP86448 CT010506.2-201ENSMUST00000225618 183 ntBASIC1.46□□□□□ -2.18
Trim43bP86448 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Trim43bP86448 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Trim43bP86448 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.45□□□□□ -2.18
Trim43bP86448 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Trim43bP86448 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.45□□□□□ -2.18
Trim43bP86448 Gm14013-201ENSMUST00000119006 270 ntBASIC1.45□□□□□ -2.18
Trim43bP86448 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.45□□□□□ -2.18
Trim43bP86448 Gm14530-201ENSMUST00000122391 333 ntBASIC1.45□□□□□ -2.18
Trim43bP86448 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.45□□□□□ -2.18
Trim43bP86448 Gm22733-201ENSMUST00000158094 91 ntBASIC1.45□□□□□ -2.18
Trim43bP86448 Gm22076-201ENSMUST00000158601 84 ntBASIC1.45□□□□□ -2.18
Trim43bP86448 Gm23025-201ENSMUST00000158769 111 ntBASIC1.45□□□□□ -2.18
Trim43bP86448 Gm9593-201ENSMUST00000166034 469 ntBASIC1.45□□□□□ -2.18
Trim43bP86448 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.45□□□□□ -2.18
Trim43bP86448 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Trim43bP86448 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Trim43bP86448 Gm27711-201ENSMUST00000183802 118 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms