Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.58□□□□□ -2
CiitaP79621 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CiitaP79621 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.57□□□□□ -2
CiitaP79621 Gm22151-201ENSMUST00000116963 58 ntBASIC2.57□□□□□ -2
CiitaP79621 Gm25335-201ENSMUST00000158043 103 ntBASIC2.57□□□□□ -2
CiitaP79621 Gm23223-201ENSMUST00000158119 127 ntBASIC2.57□□□□□ -2
CiitaP79621 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.57□□□□□ -2
CiitaP79621 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.57□□□□□ -2
CiitaP79621 AC126554.1-201ENSMUST00000222161 271 ntBASIC2.57□□□□□ -2
CiitaP79621 Gm20102-201ENSMUST00000222445 220 ntBASIC2.57□□□□□ -2
CiitaP79621 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.57□□□□□ -2
CiitaP79621 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.57□□□□□ -2
CiitaP79621 Gm23242-201ENSMUST00000083055 107 ntBASIC2.57□□□□□ -2
CiitaP79621 Gm26066-201ENSMUST00000083385 109 ntBASIC2.57□□□□□ -2
CiitaP79621 Gm25628-201ENSMUST00000084002 105 ntBASIC2.57□□□□□ -2
CiitaP79621 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.57□□□□□ -2
CiitaP79621 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.57□□□□□ -2
CiitaP79621 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
CiitaP79621 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.56□□□□□ -2
CiitaP79621 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CiitaP79621 Gm14774-201ENSMUST00000117857 536 ntBASIC2.56□□□□□ -2
CiitaP79621 Gm14530-201ENSMUST00000122391 333 ntBASIC2.56□□□□□ -2
CiitaP79621 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.56□□□□□ -2
CiitaP79621 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC2.56□□□□□ -2
CiitaP79621 Gm23169-201ENSMUST00000157157 112 ntBASIC2.56□□□□□ -2
CiitaP79621 Gm24481-201ENSMUST00000157210 102 ntBASIC2.56□□□□□ -2
CiitaP79621 Gm25384-201ENSMUST00000157807 105 ntBASIC2.56□□□□□ -2
CiitaP79621 Gm21737-201ENSMUST00000178112 664 ntBASIC2.56□□□□□ -2
CiitaP79621 Gm21815-201ENSMUST00000178213 664 ntBASIC2.56□□□□□ -2
CiitaP79621 Gm20874-201ENSMUST00000178356 663 ntBASIC2.56□□□□□ -2
CiitaP79621 Gm20901-201ENSMUST00000180177 664 ntBASIC2.56□□□□□ -2
CiitaP79621 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.56□□□□□ -2
CiitaP79621 Gm21647-201ENSMUST00000189755 664 ntBASIC2.56□□□□□ -2
CiitaP79621 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.56□□□□□ -2
CiitaP79621 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.56□□□□□ -2
CiitaP79621 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.56□□□□□ -2
CiitaP79621 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.56□□□□□ -2
CiitaP79621 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.56□□□□□ -2
CiitaP79621 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.56□□□□□ -2
CiitaP79621 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CiitaP79621 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.56□□□□□ -2
CiitaP79621 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.55□□□□□ -2
CiitaP79621 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.55□□□□□ -2
CiitaP79621 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.55□□□□□ -2
CiitaP79621 Gm14848-201ENSMUST00000121850 467 ntBASIC2.55□□□□□ -2
CiitaP79621 Gm24937-201ENSMUST00000122597 134 ntBASIC2.55□□□□□ -2
CiitaP79621 Gm24358-201ENSMUST00000158424 288 ntBASIC2.55□□□□□ -2
CiitaP79621 Gm3027-201ENSMUST00000167579 451 ntBASIC2.55□□□□□ -2
CiitaP79621 Gm24084-201ENSMUST00000175173 137 ntBASIC2.55□□□□□ -2
CiitaP79621 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.55□□□□□ -2
CiitaP79621 Gm21827-201ENSMUST00000178247 423 ntBASIC2.55□□□□□ -2
CiitaP79621 Gm28627-201ENSMUST00000186141 453 ntBASIC2.55□□□□□ -2
CiitaP79621 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.55□□□□□ -2
CiitaP79621 Gm43624-201ENSMUST00000197368 180 ntBASIC2.55□□□□□ -2
CiitaP79621 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC2.55□□□□□ -2
CiitaP79621 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.55□□□□□ -2
CiitaP79621 Gm18453-201ENSMUST00000208000 626 ntBASIC2.55□□□□□ -2
CiitaP79621 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
CiitaP79621 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.55□□□□□ -2
CiitaP79621 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.55□□□□□ -2
CiitaP79621 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CiitaP79621 Gm13880-201ENSMUST00000118421 474 ntBASIC2.54□□□□□ -2
CiitaP79621 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.54□□□□□ -2
CiitaP79621 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC2.54□□□□□ -2
CiitaP79621 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CiitaP79621 Gm27753-201ENSMUST00000184742 203 ntBASIC2.54□□□□□ -2
CiitaP79621 Gm7654-201ENSMUST00000186738 683 ntBASIC2.54□□□□□ -2
CiitaP79621 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.54□□□□□ -2
CiitaP79621 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.54□□□□□ -2
CiitaP79621 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.54□□□□□ -2
CiitaP79621 Gm45013-201ENSMUST00000206883 178 ntBASIC2.54□□□□□ -2
CiitaP79621 Gm45730-201ENSMUST00000212560 395 ntBASIC2.54□□□□□ -2
CiitaP79621 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC2.54□□□□□ -2
CiitaP79621 AC109212.1-201ENSMUST00000215561 427 ntBASIC2.54□□□□□ -2
CiitaP79621 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.54□□□□□ -2
CiitaP79621 AC104832.1-201ENSMUST00000222938 550 ntBASIC2.54□□□□□ -2
CiitaP79621 CT485612.2-201ENSMUST00000223014 151 ntBASIC2.54□□□□□ -2
CiitaP79621 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.54□□□□□ -2
CiitaP79621 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.54□□□□□ -2
CiitaP79621 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CiitaP79621 Gm25651-201ENSMUST00000083782 119 ntBASIC2.54□□□□□ -2
CiitaP79621 Gm25207-201ENSMUST00000093745 107 ntBASIC2.54□□□□□ -2
CiitaP79621 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.54□□□□□ -2
CiitaP79621 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
CiitaP79621 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CiitaP79621 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CiitaP79621 Gm24338-201ENSMUST00000104205 127 ntBASIC2.53□□□□□ -2
CiitaP79621 Snora36b-201ENSMUST00000104383 132 ntBASIC2.53□□□□□ -2
CiitaP79621 Mdga2-203ENSMUST00000113942 423 ntBASIC2.53□□□□□ -2
CiitaP79621 Gm25054-201ENSMUST00000157370 97 ntBASIC2.53□□□□□ -2
CiitaP79621 Gm23331-201ENSMUST00000157423 108 ntBASIC2.53□□□□□ -2
CiitaP79621 Gm25707-201ENSMUST00000175120 96 ntBASIC2.53□□□□□ -2
CiitaP79621 Gm22192-201ENSMUST00000175128 85 ntBASIC2.53□□□□□ -2
CiitaP79621 Gm25642-201ENSMUST00000175137 66 ntBASIC2.53□□□□□ -2
CiitaP79621 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.53□□□□□ -2
CiitaP79621 Gm37923-201ENSMUST00000191624 161 ntBASIC2.53□□□□□ -2
CiitaP79621 Mir7118-201ENSMUST00000197760 61 ntBASIC2.53□□□□□ -2
CiitaP79621 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.53□□□□□ -2
CiitaP79621 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.53□□□□□ -2
CiitaP79621 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms