Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Sf3b6P59708 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Sf3b6P59708 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.28□□□□□ -1.88
Sf3b6P59708 Gm26219-201ENSMUST00000175216 71 ntBASIC3.28□□□□□ -1.88
Sf3b6P59708 Mir6345-201ENSMUST00000184286 128 ntBASIC3.28□□□□□ -1.88
Sf3b6P59708 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.28□□□□□ -1.88
Sf3b6P59708 Gm26265-202ENSMUST00000196326 133 ntBASIC3.28□□□□□ -1.88
Sf3b6P59708 AC101945.1-201ENSMUST00000226734 466 ntBASIC3.28□□□□□ -1.88
Sf3b6P59708 Gm10042-201ENSMUST00000079884 78 ntBASIC3.28□□□□□ -1.88
Sf3b6P59708 Gm22245-201ENSMUST00000082479 103 ntBASIC3.28□□□□□ -1.88
Sf3b6P59708 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3.28□□□□□ -1.88
Sf3b6P59708 Mir302d-201ENSMUST00000083513 66 ntBASIC3.28□□□□□ -1.88
Sf3b6P59708 Gm26165-201ENSMUST00000083791 138 ntBASIC3.28□□□□□ -1.88
Sf3b6P59708 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Sf3b6P59708 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Sf3b6P59708 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Sf3b6P59708 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Sf3b6P59708 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Sf3b6P59708 Gm23271-201ENSMUST00000104052 124 ntBASIC3.27□□□□□ -1.89
Sf3b6P59708 Gm23532-201ENSMUST00000104569 112 ntBASIC3.27□□□□□ -1.89
Sf3b6P59708 Gm12351-201ENSMUST00000118727 292 ntBASIC3.27□□□□□ -1.89
Sf3b6P59708 Gm25625-201ENSMUST00000157221 96 ntBASIC3.27□□□□□ -1.89
Sf3b6P59708 Gm10292-201ENSMUST00000183142 581 ntBASIC3.27□□□□□ -1.89
Sf3b6P59708 Gm29574-201ENSMUST00000186226 696 ntBASIC3.27□□□□□ -1.89
Sf3b6P59708 Gm28159-201ENSMUST00000190296 696 ntBASIC3.27□□□□□ -1.89
Sf3b6P59708 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.27□□□□□ -1.89
Sf3b6P59708 Gm19901-201ENSMUST00000192191 495 ntBASIC3.27□□□□□ -1.89
Sf3b6P59708 CU062626.2-201ENSMUST00000223953 274 ntBASIC3.27□□□□□ -1.89
Sf3b6P59708 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.27□□□□□ -1.89
Sf3b6P59708 Gm25789-201ENSMUST00000083294 76 ntBASIC3.27□□□□□ -1.89
Sf3b6P59708 Gm23247-201ENSMUST00000083373 107 ntBASIC3.27□□□□□ -1.89
Sf3b6P59708 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Sf3b6P59708 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.27□□□□□ -1.89
Sf3b6P59708 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Sf3b6P59708 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Sf3b6P59708 Gm22713-201ENSMUST00000116895 130 ntBASIC3.26□□□□□ -1.89
Sf3b6P59708 Gm12252-201ENSMUST00000119517 219 ntBASIC3.26□□□□□ -1.89
Sf3b6P59708 Gm25223-201ENSMUST00000158200 110 ntBASIC3.26□□□□□ -1.89
Sf3b6P59708 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Sf3b6P59708 Gm25935-201ENSMUST00000178746 107 ntBASIC3.26□□□□□ -1.89
Sf3b6P59708 Gm25457-201ENSMUST00000179509 107 ntBASIC3.26□□□□□ -1.89
Sf3b6P59708 Mir6402-201ENSMUST00000183406 80 ntBASIC3.26□□□□□ -1.89
Sf3b6P59708 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.26□□□□□ -1.89
Sf3b6P59708 Gm37281-201ENSMUST00000192412 439 ntBASIC3.26□□□□□ -1.89
Sf3b6P59708 Gm44352-201ENSMUST00000196358 110 ntBASIC3.26□□□□□ -1.89
Sf3b6P59708 Gm43993-201ENSMUST00000203972 247 ntBASIC3.26□□□□□ -1.89
Sf3b6P59708 AC132615.1-201ENSMUST00000213873 255 ntBASIC3.26□□□□□ -1.89
Sf3b6P59708 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.26□□□□□ -1.89
Sf3b6P59708 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Sf3b6P59708 Gm25813-201ENSMUST00000082748 191 ntBASIC3.26□□□□□ -1.89
Sf3b6P59708 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.26□□□□□ -1.89
Sf3b6P59708 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
Sf3b6P59708 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Sf3b6P59708 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Sf3b6P59708 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
Sf3b6P59708 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.25□□□□□ -1.89
Sf3b6P59708 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Sf3b6P59708 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Sf3b6P59708 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Sf3b6P59708 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Sf3b6P59708 Gm13443-201ENSMUST00000120770 555 ntBASIC3.25□□□□□ -1.89
Sf3b6P59708 Gm24053-201ENSMUST00000158620 105 ntBASIC3.25□□□□□ -1.89
Sf3b6P59708 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Sf3b6P59708 Gm37791-201ENSMUST00000195081 286 ntBASIC3.25□□□□□ -1.89
Sf3b6P59708 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.25□□□□□ -1.89
Sf3b6P59708 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.25□□□□□ -1.89
Sf3b6P59708 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Sf3b6P59708 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Sf3b6P59708 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.25□□□□□ -1.89
Sf3b6P59708 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.25□□□□□ -1.89
Sf3b6P59708 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Sf3b6P59708 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Sf3b6P59708 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Sf3b6P59708 Gm12550-201ENSMUST00000118478 329 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 Gm12858-201ENSMUST00000121913 208 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC3.24□□□□□ -1.89
Sf3b6P59708 Gm25427-201ENSMUST00000157605 103 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 Gm24015-201ENSMUST00000157725 232 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 Gm25494-201ENSMUST00000158143 100 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 Gm22989-201ENSMUST00000158313 86 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 Gm22531-201ENSMUST00000158819 140 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 Gm25999-201ENSMUST00000175398 133 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 Mir669k-201ENSMUST00000177742 127 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 Gm25673-201ENSMUST00000179957 127 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 Trbv18-201ENSMUST00000194256 294 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.24□□□□□ -1.89
Sf3b6P59708 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 AC173345.2-201ENSMUST00000222795 153 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 AC183092.1-201ENSMUST00000224301 153 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 AC165138.1-201ENSMUST00000226984 270 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 Snora19-201ENSMUST00000082962 132 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 Snora70-201ENSMUST00000083047 137 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 Gm23658-201ENSMUST00000083233 132 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Sf3b6P59708 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.24□□□□□ -1.89
Sf3b6P59708 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms