Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 AC173482.2-201ENSMUST00000224044 750 ntBASIC0.94□□□□□ -2.26
Cux1P53564 CT025538.2-201ENSMUST00000226083 772 ntBASIC0.94□□□□□ -2.26
Cux1P53564 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Cux1P53564 Gm44562-201ENSMUST00000207194 1347 ntBASIC0.93□□□□□ -2.26
Cux1P53564 Gm14980-201ENSMUST00000121247 736 ntBASIC0.93□□□□□ -2.26
Cux1P53564 Gm24768-201ENSMUST00000158512 94 ntBASIC0.93□□□□□ -2.26
Cux1P53564 Gm21744-201ENSMUST00000178403 662 ntBASIC0.93□□□□□ -2.26
Cux1P53564 Mir6370-201ENSMUST00000183510 120 ntBASIC0.93□□□□□ -2.26
Cux1P53564 Gm29413-201ENSMUST00000186019 880 ntBASIC0.93□□□□□ -2.26
Cux1P53564 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Cux1P53564 Gm28700-201ENSMUST00000187614 579 ntBASIC0.93□□□□□ -2.26
Cux1P53564 Gm29639-201ENSMUST00000188375 580 ntBASIC0.93□□□□□ -2.26
Cux1P53564 Gm28843-201ENSMUST00000189198 678 ntBASIC0.93□□□□□ -2.26
Cux1P53564 Gm29546-201ENSMUST00000191171 678 ntBASIC0.93□□□□□ -2.26
Cux1P53564 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC0.93□□□□□ -2.26
Cux1P53564 AC114010.1-201ENSMUST00000222060 379 ntBASIC0.93□□□□□ -2.26
Cux1P53564 AC125464.1-201ENSMUST00000228013 512 ntBASIC0.93□□□□□ -2.26
Cux1P53564 Mir429-201ENSMUST00000083493 83 ntBASIC0.93□□□□□ -2.26
Cux1P53564 Gm24419-201ENSMUST00000157875 332 ntBASIC0.92□□□□□ -2.26
Cux1P53564 Gm22768-201ENSMUST00000158366 153 ntBASIC0.92□□□□□ -2.26
Cux1P53564 Mir28b-201ENSMUST00000175399 80 ntBASIC0.92□□□□□ -2.26
Cux1P53564 Gm26236-201ENSMUST00000175536 137 ntBASIC0.92□□□□□ -2.26
Cux1P53564 Gm27588-201ENSMUST00000185096 263 ntBASIC0.92□□□□□ -2.26
Cux1P53564 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC0.92□□□□□ -2.26
Cux1P53564 Gm45965-201ENSMUST00000221192 1284 ntBASIC0.92□□□□□ -2.26
Cux1P53564 AC166830.2-201ENSMUST00000225821 196 ntBASIC0.92□□□□□ -2.26
Cux1P53564 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Cux1P53564 Gm22299-201ENSMUST00000082663 136 ntBASIC0.92□□□□□ -2.26
Cux1P53564 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.92□□□□□ -2.26
Cux1P53564 Gm22452-201ENSMUST00000122804 104 ntBASIC0.91□□□□□ -2.26
Cux1P53564 Gm22088-201ENSMUST00000158341 117 ntBASIC0.91□□□□□ -2.26
Cux1P53564 Gm24229-201ENSMUST00000158830 118 ntBASIC0.91□□□□□ -2.26
Cux1P53564 Gm2966-201ENSMUST00000166052 481 ntBASIC0.91□□□□□ -2.26
Cux1P53564 Traj60-201ENSMUST00000167781 54 ntBASIC0.91□□□□□ -2.26
Cux1P53564 Gm20386-201ENSMUST00000174010 132 ntBASIC0.91□□□□□ -2.26
Cux1P53564 Gm26365-201ENSMUST00000179177 94 ntBASIC0.91□□□□□ -2.26
Cux1P53564 Mir1291-201ENSMUST00000199842 117 ntBASIC0.91□□□□□ -2.26
Cux1P53564 Gm44128-201ENSMUST00000204909 219 ntBASIC0.91□□□□□ -2.26
Cux1P53564 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC0.91□□□□□ -2.26
Cux1P53564 AC069561.3-201ENSMUST00000217321 114 ntBASIC0.91□□□□□ -2.26
Cux1P53564 Gm26175-201ENSMUST00000083794 131 ntBASIC0.91□□□□□ -2.26
Cux1P53564 Gm381-201ENSMUST00000117443 2037 ntBASIC0.91□□□□□ -2.26
Cux1P53564 Gm13087-201ENSMUST00000118298 256 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Gm22098-201ENSMUST00000157930 85 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Gm23339-201ENSMUST00000158962 139 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Gm22111-201ENSMUST00000178010 79 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Gm23687-201ENSMUST00000178664 79 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Gm24566-201ENSMUST00000179286 79 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Gm21758-201ENSMUST00000179336 819 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Gm23305-201ENSMUST00000179342 79 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Gm26389-201ENSMUST00000179819 79 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Gm22130-201ENSMUST00000179979 79 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Gm22393-201ENSMUST00000180153 79 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Gm25085-201ENSMUST00000180298 79 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Gm29647-201ENSMUST00000188795 666 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Gm20832-201ENSMUST00000189076 665 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Gm28241-201ENSMUST00000190916 235 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Gm28504-201ENSMUST00000190977 666 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Gm35843-201ENSMUST00000193716 666 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC0.9□□□□□ -2.26
Cux1P53564 Gm36728-201ENSMUST00000195782 665 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Gm18691-201ENSMUST00000203593 872 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.9□□□□□ -2.26
Cux1P53564 Gm45616-201ENSMUST00000211711 319 ntBASIC0.9□□□□□ -2.26
Cux1P53564 AC154552.4-201ENSMUST00000222171 151 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Snord32a-201ENSMUST00000083285 83 ntBASIC0.9□□□□□ -2.26
Cux1P53564 Gm15193-201ENSMUST00000120224 865 ntBASIC0.89□□□□□ -2.27
Cux1P53564 Gm6025-201ENSMUST00000121517 201 ntBASIC0.89□□□□□ -2.27
Cux1P53564 Gm22611-201ENSMUST00000158288 150 ntBASIC0.89□□□□□ -2.27
Cux1P53564 Gm22392-201ENSMUST00000177971 107 ntBASIC0.89□□□□□ -2.27
Cux1P53564 Gm6660-201ENSMUST00000179149 468 ntBASIC0.89□□□□□ -2.27
Cux1P53564 Gm38274-201ENSMUST00000195689 148 ntBASIC0.89□□□□□ -2.27
Cux1P53564 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC0.89□□□□□ -2.27
Cux1P53564 Gm25257-201ENSMUST00000083907 110 ntBASIC0.89□□□□□ -2.27
Cux1P53564 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Cux1P53564 Gm22779-201ENSMUST00000104085 107 ntBASIC0.89□□□□□ -2.27
Cux1P53564 Mir1197-201ENSMUST00000117037 120 ntBASIC0.89□□□□□ -2.27
Cux1P53564 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
Cux1P53564 Gm20118-201ENSMUST00000187207 162 ntBASIC0.89□□□□□ -2.27
Cux1P53564 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC0.89□□□□□ -2.27
Cux1P53564 Gm43199-201ENSMUST00000200019 307 ntBASIC0.89□□□□□ -2.27
Cux1P53564 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.89□□□□□ -2.27
Cux1P53564 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC0.89□□□□□ -2.27
Cux1P53564 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.89□□□□□ -2.27
Cux1P53564 Gm22997-201ENSMUST00000082845 107 ntBASIC0.89□□□□□ -2.27
Cux1P53564 Gm26166-201ENSMUST00000083788 107 ntBASIC0.89□□□□□ -2.27
Cux1P53564 Gm25008-201ENSMUST00000083809 81 ntBASIC0.89□□□□□ -2.27
Cux1P53564 Gm3563-201ENSMUST00000172963 1628 ntBASIC0.88□□□□□ -2.27
Cux1P53564 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Cux1P53564 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Cux1P53564 Gm13672-201ENSMUST00000117554 459 ntBASIC0.88□□□□□ -2.27
Cux1P53564 Gm14594-201ENSMUST00000118052 537 ntBASIC0.88□□□□□ -2.27
Cux1P53564 Gm14590-201ENSMUST00000118934 537 ntBASIC0.88□□□□□ -2.27
Cux1P53564 Gm12507-201ENSMUST00000119155 415 ntBASIC0.88□□□□□ -2.27
Cux1P53564 n-R5s187-201ENSMUST00000122769 111 ntBASIC0.88□□□□□ -2.27
Cux1P53564 Gm23170-201ENSMUST00000157158 106 ntBASIC0.88□□□□□ -2.27
Cux1P53564 Gm22338-201ENSMUST00000157715 129 ntBASIC0.88□□□□□ -2.27
Cux1P53564 Gm26487-201ENSMUST00000158022 94 ntBASIC0.88□□□□□ -2.27
Cux1P53564 Gm23994-201ENSMUST00000158059 88 ntBASIC0.88□□□□□ -2.27
Cux1P53564 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms