Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm10033-201ENSMUST00000072427 1813 ntBASIC3.37□□□□□ -1.87
Shmt1P50431 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Shmt1P50431 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Shmt1P50431 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.36□□□□□ -1.87
Shmt1P50431 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Shmt1P50431 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.36□□□□□ -1.87
Shmt1P50431 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Shmt1P50431 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Shmt1P50431 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Shmt1P50431 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Shmt1P50431 Gm15846-201ENSMUST00000116022 320 ntBASIC3.36□□□□□ -1.87
Shmt1P50431 Gm14389-201ENSMUST00000140453 241 ntBASIC3.36□□□□□ -1.87
Shmt1P50431 Gm20672-201ENSMUST00000176605 261 ntBASIC3.36□□□□□ -1.87
Shmt1P50431 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Shmt1P50431 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Shmt1P50431 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.36□□□□□ -1.87
Shmt1P50431 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.36□□□□□ -1.87
Shmt1P50431 Mir181b-2-201ENSMUST00000083644 89 ntBASIC3.36□□□□□ -1.87
Shmt1P50431 Gm26314-201ENSMUST00000083891 107 ntBASIC3.36□□□□□ -1.87
Shmt1P50431 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Shmt1P50431 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Shmt1P50431 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Shmt1P50431 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Shmt1P50431 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Shmt1P50431 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Shmt1P50431 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.35□□□□□ -1.87
Shmt1P50431 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.35□□□□□ -1.87
Shmt1P50431 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.35□□□□□ -1.87
Shmt1P50431 Gm24121-201ENSMUST00000102029 106 ntBASIC3.35□□□□□ -1.87
Shmt1P50431 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC3.35□□□□□ -1.87
Shmt1P50431 Gm15896-201ENSMUST00000118045 440 ntBASIC3.35□□□□□ -1.87
Shmt1P50431 Gm12512-201ENSMUST00000119620 217 ntBASIC3.35□□□□□ -1.87
Shmt1P50431 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.35□□□□□ -1.87
Shmt1P50431 Gm22766-201ENSMUST00000158372 99 ntBASIC3.35□□□□□ -1.87
Shmt1P50431 Gm23350-201ENSMUST00000158429 103 ntBASIC3.35□□□□□ -1.87
Shmt1P50431 Gm16326-201ENSMUST00000162843 414 ntBASIC3.35□□□□□ -1.87
Shmt1P50431 Gm5967-201ENSMUST00000172723 494 ntBASIC3.35□□□□□ -1.87
Shmt1P50431 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC3.35□□□□□ -1.87
Shmt1P50431 Gm43704-201ENSMUST00000196164 496 ntBASIC3.35□□□□□ -1.87
Shmt1P50431 Mir376a-201ENSMUST00000197584 68 ntBASIC3.35□□□□□ -1.87
Shmt1P50431 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Shmt1P50431 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Shmt1P50431 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Shmt1P50431 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Shmt1P50431 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Shmt1P50431 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.34□□□□□ -1.87
Shmt1P50431 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Shmt1P50431 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Shmt1P50431 Gm22784-201ENSMUST00000104088 132 ntBASIC3.34□□□□□ -1.87
Shmt1P50431 Gm13345-201ENSMUST00000121928 228 ntBASIC3.34□□□□□ -1.87
Shmt1P50431 Gm11819-201ENSMUST00000122192 372 ntBASIC3.34□□□□□ -1.87
Shmt1P50431 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.34□□□□□ -1.87
Shmt1P50431 Gm25720-201ENSMUST00000157503 105 ntBASIC3.34□□□□□ -1.87
Shmt1P50431 Gm24997-201ENSMUST00000157910 105 ntBASIC3.34□□□□□ -1.87
Shmt1P50431 Gm22315-201ENSMUST00000158010 143 ntBASIC3.34□□□□□ -1.87
Shmt1P50431 Gm28002-201ENSMUST00000184832 100 ntBASIC3.34□□□□□ -1.87
Shmt1P50431 Gm43402-201ENSMUST00000197159 159 ntBASIC3.34□□□□□ -1.87
Shmt1P50431 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.34□□□□□ -1.87
Shmt1P50431 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC3.34□□□□□ -1.87
Shmt1P50431 Gm43978-201ENSMUST00000203491 451 ntBASIC3.34□□□□□ -1.87
Shmt1P50431 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC3.34□□□□□ -1.87
Shmt1P50431 AC155712.1-201ENSMUST00000219704 160 ntBASIC3.34□□□□□ -1.87
Shmt1P50431 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.34□□□□□ -1.87
Shmt1P50431 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Shmt1P50431 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Shmt1P50431 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.33□□□□□ -1.88
Shmt1P50431 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Shmt1P50431 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Shmt1P50431 Gm14775-201ENSMUST00000122089 310 ntBASIC3.33□□□□□ -1.88
Shmt1P50431 Gm25783-201ENSMUST00000122525 190 ntBASIC3.33□□□□□ -1.88
Shmt1P50431 Gm26477-201ENSMUST00000122617 323 ntBASIC3.33□□□□□ -1.88
Shmt1P50431 Trav20-201ENSMUST00000142754 347 ntBASIC3.33□□□□□ -1.88
Shmt1P50431 Gm26279-201ENSMUST00000157095 102 ntBASIC3.33□□□□□ -1.88
Shmt1P50431 Gm28020-201ENSMUST00000157739 67 ntBASIC3.33□□□□□ -1.88
Shmt1P50431 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Shmt1P50431 Gm37361-201ENSMUST00000194345 132 ntBASIC3.33□□□□□ -1.88
Shmt1P50431 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.33□□□□□ -1.88
Shmt1P50431 Gm44519-201ENSMUST00000206486 122 ntBASIC3.33□□□□□ -1.88
Shmt1P50431 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.33□□□□□ -1.88
Shmt1P50431 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC3.33□□□□□ -1.88
Shmt1P50431 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.33□□□□□ -1.88
Shmt1P50431 Gm23517-201ENSMUST00000082830 192 ntBASIC3.33□□□□□ -1.88
Shmt1P50431 Gm25896-201ENSMUST00000083713 136 ntBASIC3.33□□□□□ -1.88
Shmt1P50431 Gm23731-201ENSMUST00000083749 107 ntBASIC3.33□□□□□ -1.88
Shmt1P50431 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Shmt1P50431 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Shmt1P50431 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.32□□□□□ -1.88
Shmt1P50431 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Shmt1P50431 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Shmt1P50431 Mir1198-201ENSMUST00000116995 121 ntBASIC3.32□□□□□ -1.88
Shmt1P50431 Gm6897-201ENSMUST00000117714 138 ntBASIC3.32□□□□□ -1.88
Shmt1P50431 Gm12797-201ENSMUST00000118645 273 ntBASIC3.32□□□□□ -1.88
Shmt1P50431 Gm14758-201ENSMUST00000119104 138 ntBASIC3.32□□□□□ -1.88
Shmt1P50431 Gm13443-201ENSMUST00000120770 555 ntBASIC3.32□□□□□ -1.88
Shmt1P50431 Gm23640-201ENSMUST00000157860 104 ntBASIC3.32□□□□□ -1.88
Shmt1P50431 Gm24392-201ENSMUST00000158136 103 ntBASIC3.32□□□□□ -1.88
Shmt1P50431 Gm24001-201ENSMUST00000158463 85 ntBASIC3.32□□□□□ -1.88
Shmt1P50431 Gm24667-201ENSMUST00000158938 103 ntBASIC3.32□□□□□ -1.88
Shmt1P50431 Gm27308-201ENSMUST00000184807 233 ntBASIC3.32□□□□□ -1.88
Shmt1P50431 Gm44393-201ENSMUST00000197418 138 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 113.5 ms