Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC3.1□□□□□ -1.91
Ercc3P49135 Gm23641-201ENSMUST00000157857 101 ntBASIC3.1□□□□□ -1.91
Ercc3P49135 Gm22328-201ENSMUST00000158074 112 ntBASIC3.1□□□□□ -1.91
Ercc3P49135 Gm3027-201ENSMUST00000167579 451 ntBASIC3.1□□□□□ -1.91
Ercc3P49135 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.1□□□□□ -1.91
Ercc3P49135 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.1□□□□□ -1.91
Ercc3P49135 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC3.1□□□□□ -1.91
Ercc3P49135 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC3.1□□□□□ -1.91
Ercc3P49135 Gm45879-201ENSMUST00000212521 392 ntBASIC3.1□□□□□ -1.91
Ercc3P49135 Gm22806-201ENSMUST00000082738 136 ntBASIC3.1□□□□□ -1.91
Ercc3P49135 Snord7-201ENSMUST00000083781 97 ntBASIC3.1□□□□□ -1.91
Ercc3P49135 Gm22353-201ENSMUST00000083918 136 ntBASIC3.1□□□□□ -1.91
Ercc3P49135 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Ercc3P49135 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ercc3P49135 Gm26102-201ENSMUST00000157251 284 ntBASIC3.09□□□□□ -1.91
Ercc3P49135 Gm24911-201ENSMUST00000157292 136 ntBASIC3.09□□□□□ -1.91
Ercc3P49135 Gm24291-201ENSMUST00000157633 162 ntBASIC3.09□□□□□ -1.91
Ercc3P49135 Mir3076-201ENSMUST00000175415 60 ntBASIC3.09□□□□□ -1.91
Ercc3P49135 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC3.09□□□□□ -1.91
Ercc3P49135 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.09□□□□□ -1.91
Ercc3P49135 Gm18453-201ENSMUST00000208000 626 ntBASIC3.09□□□□□ -1.91
Ercc3P49135 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC3.09□□□□□ -1.91
Ercc3P49135 Gm45522-201ENSMUST00000210784 166 ntBASIC3.09□□□□□ -1.91
Ercc3P49135 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ercc3P49135 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Ercc3P49135 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Ercc3P49135 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ercc3P49135 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ercc3P49135 Gm23557-201ENSMUST00000157820 138 ntBASIC3.08□□□□□ -1.92
Ercc3P49135 Gm24737-201ENSMUST00000158861 100 ntBASIC3.08□□□□□ -1.92
Ercc3P49135 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ercc3P49135 Gm20660-201ENSMUST00000177515 289 ntBASIC3.08□□□□□ -1.92
Ercc3P49135 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Ercc3P49135 Gm24304-201ENSMUST00000177635 107 ntBASIC3.08□□□□□ -1.92
Ercc3P49135 Gm23660-201ENSMUST00000178362 79 ntBASIC3.08□□□□□ -1.92
Ercc3P49135 Gm24088-201ENSMUST00000179100 79 ntBASIC3.08□□□□□ -1.92
Ercc3P49135 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC3.08□□□□□ -1.92
Ercc3P49135 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.08□□□□□ -1.92
Ercc3P49135 Gm28744-201ENSMUST00000189939 340 ntBASIC3.08□□□□□ -1.92
Ercc3P49135 Gm37054-201ENSMUST00000193481 543 ntBASIC3.08□□□□□ -1.92
Ercc3P49135 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.08□□□□□ -1.92
Ercc3P49135 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.08□□□□□ -1.92
Ercc3P49135 AC130821.1-201ENSMUST00000221997 293 ntBASIC3.08□□□□□ -1.92
Ercc3P49135 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.08□□□□□ -1.92
Ercc3P49135 Gm23249-201ENSMUST00000083369 161 ntBASIC3.08□□□□□ -1.92
Ercc3P49135 Gm22782-201ENSMUST00000104082 132 ntBASIC3.07□□□□□ -1.92
Ercc3P49135 Gm24275-201ENSMUST00000116780 146 ntBASIC3.07□□□□□ -1.92
Ercc3P49135 Gm13457-201ENSMUST00000117885 267 ntBASIC3.07□□□□□ -1.92
Ercc3P49135 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.07□□□□□ -1.92
Ercc3P49135 Gm14269-201ENSMUST00000120455 306 ntBASIC3.07□□□□□ -1.92
Ercc3P49135 Gm25982-201ENSMUST00000157920 101 ntBASIC3.07□□□□□ -1.92
Ercc3P49135 Gm22483-201ENSMUST00000157986 274 ntBASIC3.07□□□□□ -1.92
Ercc3P49135 Gm24499-201ENSMUST00000158446 104 ntBASIC3.07□□□□□ -1.92
Ercc3P49135 Gm25653-201ENSMUST00000158473 138 ntBASIC3.07□□□□□ -1.92
Ercc3P49135 Gm24813-201ENSMUST00000175310 84 ntBASIC3.07□□□□□ -1.92
Ercc3P49135 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC3.07□□□□□ -1.92
Ercc3P49135 Gm43238-201ENSMUST00000196463 359 ntBASIC3.07□□□□□ -1.92
Ercc3P49135 Gm43680-201ENSMUST00000199466 340 ntBASIC3.07□□□□□ -1.92
Ercc3P49135 Gm43264-201ENSMUST00000202284 325 ntBASIC3.07□□□□□ -1.92
Ercc3P49135 Gm45315-201ENSMUST00000209283 333 ntBASIC3.07□□□□□ -1.92
Ercc3P49135 Gm45815-201ENSMUST00000220241 146 ntBASIC3.07□□□□□ -1.92
Ercc3P49135 AC132954.1-201ENSMUST00000221017 342 ntBASIC3.07□□□□□ -1.92
Ercc3P49135 Gm24623-201ENSMUST00000082616 194 ntBASIC3.07□□□□□ -1.92
Ercc3P49135 Gm26111-201ENSMUST00000083969 106 ntBASIC3.07□□□□□ -1.92
Ercc3P49135 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ercc3P49135 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.06□□□□□ -1.92
Ercc3P49135 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.06□□□□□ -1.92
Ercc3P49135 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.06□□□□□ -1.92
Ercc3P49135 Snord98-201ENSMUST00000116819 65 ntBASIC3.06□□□□□ -1.92
Ercc3P49135 Gm12550-201ENSMUST00000118478 329 ntBASIC3.06□□□□□ -1.92
Ercc3P49135 Gm12443-201ENSMUST00000122308 323 ntBASIC3.06□□□□□ -1.92
Ercc3P49135 Gm25384-201ENSMUST00000157807 105 ntBASIC3.06□□□□□ -1.92
Ercc3P49135 Gm25454-201ENSMUST00000157947 315 ntBASIC3.06□□□□□ -1.92
Ercc3P49135 Gm24922-201ENSMUST00000158511 102 ntBASIC3.06□□□□□ -1.92
Ercc3P49135 Gm22500-201ENSMUST00000158982 99 ntBASIC3.06□□□□□ -1.92
Ercc3P49135 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
Ercc3P49135 Gm23963-201ENSMUST00000179603 77 ntBASIC3.06□□□□□ -1.92
Ercc3P49135 Gm19257-201ENSMUST00000186121 183 ntBASIC3.06□□□□□ -1.92
Ercc3P49135 Gm29229-201ENSMUST00000188874 323 ntBASIC3.06□□□□□ -1.92
Ercc3P49135 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC3.06□□□□□ -1.92
Ercc3P49135 Gm37923-201ENSMUST00000191624 161 ntBASIC3.06□□□□□ -1.92
Ercc3P49135 Trbv7-201ENSMUST00000193339 402 ntBASIC3.06□□□□□ -1.92
Ercc3P49135 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Ercc3P49135 Gm44903-201ENSMUST00000206840 130 ntBASIC3.06□□□□□ -1.92
Ercc3P49135 AC147240.1-201ENSMUST00000218767 431 ntBASIC3.06□□□□□ -1.92
Ercc3P49135 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.06□□□□□ -1.92
Ercc3P49135 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ercc3P49135 Gm25079-201ENSMUST00000082529 203 ntBASIC3.06□□□□□ -1.92
Ercc3P49135 Gm25512-201ENSMUST00000083863 107 ntBASIC3.06□□□□□ -1.92
Ercc3P49135 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Ercc3P49135 Gm24172-201ENSMUST00000104127 117 ntBASIC3.05□□□□□ -1.92
Ercc3P49135 Gm24280-201ENSMUST00000104237 134 ntBASIC3.05□□□□□ -1.92
Ercc3P49135 Gm23202-201ENSMUST00000104376 129 ntBASIC3.05□□□□□ -1.92
Ercc3P49135 Gm13672-201ENSMUST00000117554 459 ntBASIC3.05□□□□□ -1.92
Ercc3P49135 Gm14678-201ENSMUST00000121396 482 ntBASIC3.05□□□□□ -1.92
Ercc3P49135 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.05□□□□□ -1.92
Ercc3P49135 Gm26105-201ENSMUST00000157253 190 ntBASIC3.05□□□□□ -1.92
Ercc3P49135 Gm23599-201ENSMUST00000157261 251 ntBASIC3.05□□□□□ -1.92
Ercc3P49135 Gm26411-201ENSMUST00000157668 107 ntBASIC3.05□□□□□ -1.92
Ercc3P49135 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms