Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.11□□□□□ -2.23
Cdx2P43241 Gm22997-201ENSMUST00000082845 107 ntBASIC1.11□□□□□ -2.23
Cdx2P43241 Mir223-201ENSMUST00000102112 110 ntBASIC1.1□□□□□ -2.23
Cdx2P43241 Gm25506-201ENSMUST00000104339 70 ntBASIC1.1□□□□□ -2.23
Cdx2P43241 Gm14558-201ENSMUST00000117458 381 ntBASIC1.1□□□□□ -2.23
Cdx2P43241 Gm11857-201ENSMUST00000119817 324 ntBASIC1.1□□□□□ -2.23
Cdx2P43241 Gm14678-201ENSMUST00000121396 482 ntBASIC1.1□□□□□ -2.23
Cdx2P43241 Gm23429-201ENSMUST00000122486 149 ntBASIC1.1□□□□□ -2.23
Cdx2P43241 Gm25294-201ENSMUST00000122791 104 ntBASIC1.1□□□□□ -2.23
Cdx2P43241 Gm22338-201ENSMUST00000157715 129 ntBASIC1.1□□□□□ -2.23
Cdx2P43241 Gm25044-201ENSMUST00000158603 104 ntBASIC1.1□□□□□ -2.23
Cdx2P43241 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Cdx2P43241 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.1□□□□□ -2.23
Cdx2P43241 Gm25035-201ENSMUST00000175414 77 ntBASIC1.1□□□□□ -2.23
Cdx2P43241 Mir6341-201ENSMUST00000183490 121 ntBASIC1.1□□□□□ -2.23
Cdx2P43241 Mir7683-201ENSMUST00000183842 61 ntBASIC1.1□□□□□ -2.23
Cdx2P43241 Mir6382-201ENSMUST00000184055 110 ntBASIC1.1□□□□□ -2.23
Cdx2P43241 Gm31230-201ENSMUST00000199725 785 ntBASIC1.1□□□□□ -2.23
Cdx2P43241 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.1□□□□□ -2.23
Cdx2P43241 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Cdx2P43241 Gm44609-201ENSMUST00000207157 460 ntBASIC1.1□□□□□ -2.23
Cdx2P43241 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.1□□□□□ -2.23
Cdx2P43241 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.1□□□□□ -2.23
Cdx2P43241 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.1□□□□□ -2.23
Cdx2P43241 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.1□□□□□ -2.23
Cdx2P43241 AC168880.1-201ENSMUST00000225113 707 ntBASIC1.1□□□□□ -2.23
Cdx2P43241 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Cdx2P43241 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Cdx2P43241 Gm13885-201ENSMUST00000117569 187 ntBASIC1.09□□□□□ -2.23
Cdx2P43241 Gm12304-201ENSMUST00000120312 385 ntBASIC1.09□□□□□ -2.23
Cdx2P43241 Gm15167-201ENSMUST00000121997 187 ntBASIC1.09□□□□□ -2.23
Cdx2P43241 Gm16129-201ENSMUST00000152628 486 ntBASIC1.09□□□□□ -2.23
Cdx2P43241 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Cdx2P43241 Mir3964-201ENSMUST00000174898 74 ntBASIC1.09□□□□□ -2.23
Cdx2P43241 Gm25730-201ENSMUST00000178753 165 ntBASIC1.09□□□□□ -2.23
Cdx2P43241 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.09□□□□□ -2.23
Cdx2P43241 Gm44666-201ENSMUST00000208544 391 ntBASIC1.09□□□□□ -2.23
Cdx2P43241 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.09□□□□□ -2.23
Cdx2P43241 Gm46136-201ENSMUST00000214730 565 ntBASIC1.09□□□□□ -2.23
Cdx2P43241 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.09□□□□□ -2.23
Cdx2P43241 AC131085.1-201ENSMUST00000224746 656 ntBASIC1.09□□□□□ -2.23
Cdx2P43241 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.09□□□□□ -2.23
Cdx2P43241 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Cdx2P43241 Gm26328-201ENSMUST00000082821 107 ntBASIC1.09□□□□□ -2.23
Cdx2P43241 Gm25794-201ENSMUST00000083286 107 ntBASIC1.09□□□□□ -2.23
Cdx2P43241 Gm23848-201ENSMUST00000083826 106 ntBASIC1.09□□□□□ -2.23
Cdx2P43241 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.08□□□□□ -2.24
Cdx2P43241 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Cdx2P43241 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.08□□□□□ -2.24
Cdx2P43241 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.08□□□□□ -2.24
Cdx2P43241 Gm23705-201ENSMUST00000104370 130 ntBASIC1.08□□□□□ -2.24
Cdx2P43241 Gm25495-201ENSMUST00000104431 131 ntBASIC1.08□□□□□ -2.24
Cdx2P43241 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.08□□□□□ -2.24
Cdx2P43241 Gm8114-201ENSMUST00000172225 484 ntBASIC1.08□□□□□ -2.24
Cdx2P43241 Gm25874-201ENSMUST00000178030 79 ntBASIC1.08□□□□□ -2.24
Cdx2P43241 Gm4076-201ENSMUST00000179230 965 ntBASIC1.08□□□□□ -2.24
Cdx2P43241 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Cdx2P43241 Gm27271-201ENSMUST00000183509 170 ntBASIC1.08□□□□□ -2.24
Cdx2P43241 Gm37319-201ENSMUST00000193500 636 ntBASIC1.08□□□□□ -2.24
Cdx2P43241 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.08□□□□□ -2.24
Cdx2P43241 AC154252.1-201ENSMUST00000226041 473 ntBASIC1.08□□□□□ -2.24
Cdx2P43241 CT030684.2-201ENSMUST00000228946 826 ntBASIC1.08□□□□□ -2.24
Cdx2P43241 Gm26175-201ENSMUST00000083794 131 ntBASIC1.08□□□□□ -2.24
Cdx2P43241 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.08□□□□□ -2.24
Cdx2P43241 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Cdx2P43241 Gm19428-201ENSMUST00000220512 1995 ntBASIC1.07□□□□□ -2.24
Cdx2P43241 Gm23907-201ENSMUST00000104595 189 ntBASIC1.07□□□□□ -2.24
Cdx2P43241 Mir467h-201ENSMUST00000116759 121 ntBASIC1.07□□□□□ -2.24
Cdx2P43241 Gm2003-201ENSMUST00000118537 636 ntBASIC1.07□□□□□ -2.24
Cdx2P43241 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.07□□□□□ -2.24
Cdx2P43241 Gm2020-201ENSMUST00000145242 579 ntBASIC1.07□□□□□ -2.24
Cdx2P43241 Gm25156-201ENSMUST00000179809 79 ntBASIC1.07□□□□□ -2.24
Cdx2P43241 Gm18356-201ENSMUST00000185677 623 ntBASIC1.07□□□□□ -2.24
Cdx2P43241 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Cdx2P43241 Gm37102-201ENSMUST00000195740 1105 ntBASIC1.07□□□□□ -2.24
Cdx2P43241 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
Cdx2P43241 Gm24865-201ENSMUST00000103246 96 ntBASIC1.06□□□□□ -2.24
Cdx2P43241 Gm23015-201ENSMUST00000104145 128 ntBASIC1.06□□□□□ -2.24
Cdx2P43241 Gm14785-201ENSMUST00000120185 539 ntBASIC1.06□□□□□ -2.24
Cdx2P43241 Gm24997-201ENSMUST00000157910 105 ntBASIC1.06□□□□□ -2.24
Cdx2P43241 Gm22663-201ENSMUST00000158721 102 ntBASIC1.06□□□□□ -2.24
Cdx2P43241 Gm3025-201ENSMUST00000163454 489 ntBASIC1.06□□□□□ -2.24
Cdx2P43241 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.06□□□□□ -2.24
Cdx2P43241 Gm25936-201ENSMUST00000179952 114 ntBASIC1.06□□□□□ -2.24
Cdx2P43241 Gm28283-201ENSMUST00000185509 178 ntBASIC1.06□□□□□ -2.24
Cdx2P43241 Gm28666-201ENSMUST00000186649 274 ntBASIC1.06□□□□□ -2.24
Cdx2P43241 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC1.06□□□□□ -2.24
Cdx2P43241 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.06□□□□□ -2.24
Cdx2P43241 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Cdx2P43241 Snord14a-201ENSMUST00000082807 87 ntBASIC1.06□□□□□ -2.24
Cdx2P43241 Gm26493-201ENSMUST00000083155 136 ntBASIC1.06□□□□□ -2.24
Cdx2P43241 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.06□□□□□ -2.24
Cdx2P43241 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.06□□□□□ -2.24
Cdx2P43241 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Cdx2P43241 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC1.05□□□□□ -2.24
Cdx2P43241 Gm27396-201ENSMUST00000157708 58 ntBASIC1.05□□□□□ -2.24
Cdx2P43241 Gm23078-201ENSMUST00000157848 148 ntBASIC1.05□□□□□ -2.24
Cdx2P43241 Gm25454-201ENSMUST00000157947 315 ntBASIC1.05□□□□□ -2.24
Cdx2P43241 Gm22944-201ENSMUST00000158662 133 ntBASIC1.05□□□□□ -2.24
Cdx2P43241 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 120.2 ms