Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm20857-201ENSMUST00000194766 657 ntBASIC0□□□□□ -2.41
HttP42859 Gm20858-201ENSMUST00000195459 657 ntBASIC0□□□□□ -2.41
HttP42859 Gm30638-201ENSMUST00000195570 656 ntBASIC0□□□□□ -2.41
HttP42859 Gm43974-201ENSMUST00000205080 684 ntBASIC0□□□□□ -2.41
HttP42859 Gm24611-201ENSMUST00000083272 107 ntBASIC0□□□□□ -2.41
HttP42859 Olfr1160-201ENSMUST00000099839 960 ntBASIC0□□□□□ -2.41
HttP42859 Gm25309-201ENSMUST00000116728 126 ntBASIC-0□□□□□ -2.41
HttP42859 Gm25666-201ENSMUST00000157702 107 ntBASIC-0□□□□□ -2.41
HttP42859 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC-0□□□□□ -2.41
HttP42859 Gm27869-201ENSMUST00000184327 122 ntBASIC-0□□□□□ -2.41
HttP42859 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC-0□□□□□ -2.41
HttP42859 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC-0□□□□□ -2.41
HttP42859 Gm25136-201ENSMUST00000083253 115 ntBASIC-0□□□□□ -2.41
HttP42859 Gm14917-201ENSMUST00000118872 2105 ntBASIC-0□□□□□ -2.41
HttP42859 Gm13378-201ENSMUST00000117483 336 ntBASIC-0.01□□□□□ -2.41
HttP42859 Gm7953-201ENSMUST00000168278 469 ntBASIC-0.01□□□□□ -2.41
HttP42859 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC-0.01□□□□□ -2.41
HttP42859 Gm44657-201ENSMUST00000208568 450 ntBASIC-0.01□□□□□ -2.41
HttP42859 AC113441.1-201ENSMUST00000223464 134 ntBASIC-0.01□□□□□ -2.41
HttP42859 Gm25393-201ENSMUST00000157336 285 ntBASIC-0.01□□□□□ -2.41
HttP42859 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.01□□□□□ -2.41
HttP42859 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.01□□□□□ -2.41
HttP42859 Gm29413-201ENSMUST00000186019 880 ntBASIC-0.01□□□□□ -2.41
HttP42859 Gm21147-201ENSMUST00000186046 913 ntBASIC-0.01□□□□□ -2.41
HttP42859 Gm29134-201ENSMUST00000186579 126 ntBASIC-0.01□□□□□ -2.41
HttP42859 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
HttP42859 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC-0.01□□□□□ -2.41
HttP42859 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
HttP42859 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
HttP42859 Gm29639-201ENSMUST00000188375 580 ntBASIC-0.01□□□□□ -2.41
HttP42859 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
HttP42859 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
HttP42859 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
HttP42859 Gm28337-201ENSMUST00000190425 666 ntBASIC-0.01□□□□□ -2.41
HttP42859 Gm31123-201ENSMUST00000192094 666 ntBASIC-0.01□□□□□ -2.41
HttP42859 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC-0.01□□□□□ -2.41
HttP42859 Gm18551-201ENSMUST00000195594 642 ntBASIC-0.01□□□□□ -2.41
HttP42859 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC-0.01□□□□□ -2.41
HttP42859 AC167140.1-201ENSMUST00000224710 403 ntBASIC-0.01□□□□□ -2.41
HttP42859 Mirlet7g-201ENSMUST00000083506 88 ntBASIC-0.01□□□□□ -2.41
HttP42859 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC-0.01□□□□□ -2.41
HttP42859 Gm25961-201ENSMUST00000157174 135 ntBASIC-0.02□□□□□ -2.41
HttP42859 Gm37568-201ENSMUST00000191755 364 ntBASIC-0.02□□□□□ -2.41
HttP42859 Gm19147-201ENSMUST00000199622 652 ntBASIC-0.02□□□□□ -2.41
HttP42859 Gm18268-201ENSMUST00000208445 943 ntBASIC-0.02□□□□□ -2.41
HttP42859 AC167229.1-201ENSMUST00000220057 469 ntBASIC-0.02□□□□□ -2.41
HttP42859 Gm23455-201ENSMUST00000083331 100 ntBASIC-0.02□□□□□ -2.41
HttP42859 Gm23247-201ENSMUST00000083373 107 ntBASIC-0.02□□□□□ -2.41
HttP42859 Gm14442-201ENSMUST00000119690 1736 ntBASIC-0.02□□□□□ -2.41
HttP42859 Gm24588-201ENSMUST00000116696 83 ntBASIC-0.02□□□□□ -2.41
HttP42859 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC-0.02□□□□□ -2.41
HttP42859 Gm20613-201ENSMUST00000175828 345 ntBASIC-0.02□□□□□ -2.41
HttP42859 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC-0.02□□□□□ -2.41
HttP42859 Gm45387-201ENSMUST00000209792 632 ntBASIC-0.02□□□□□ -2.41
HttP42859 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC-0.02□□□□□ -2.41
HttP42859 Mir467h-201ENSMUST00000116759 121 ntBASIC-0.02□□□□□ -2.41
HttP42859 Gm26303-201ENSMUST00000116845 119 ntBASIC-0.02□□□□□ -2.41
HttP42859 Gm25968-201ENSMUST00000157167 100 ntBASIC-0.02□□□□□ -2.41
HttP42859 Gm23339-201ENSMUST00000158962 139 ntBASIC-0.02□□□□□ -2.41
HttP42859 Gm16289-201ENSMUST00000162079 183 ntBASIC-0.02□□□□□ -2.41
HttP42859 Gm22131-201ENSMUST00000178415 94 ntBASIC-0.02□□□□□ -2.41
HttP42859 Gm29005-201ENSMUST00000186773 320 ntBASIC-0.02□□□□□ -2.41
HttP42859 Gm37720-201ENSMUST00000195497 1241 ntBASIC-0.03□□□□□ -2.41
HttP42859 AC123803.1-201ENSMUST00000216093 189 ntBASIC-0.03□□□□□ -2.41
HttP42859 AC122465.3-201ENSMUST00000221644 355 ntBASIC-0.03□□□□□ -2.41
HttP42859 CT030166.1-201ENSMUST00000222654 357 ntBASIC-0.03□□□□□ -2.41
HttP42859 AC102352.1-201ENSMUST00000224187 582 ntBASIC-0.03□□□□□ -2.41
HttP42859 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
HttP42859 Gm14972-201ENSMUST00000121780 364 ntBASIC-0.03□□□□□ -2.41
HttP42859 Gm24808-201ENSMUST00000157993 118 ntBASIC-0.03□□□□□ -2.41
HttP42859 Gm25952-201ENSMUST00000175329 74 ntBASIC-0.03□□□□□ -2.41
HttP42859 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.03□□□□□ -2.41
HttP42859 AC164161.1-201ENSMUST00000214076 639 ntBASIC-0.03□□□□□ -2.41
HttP42859 Mir124a-3-201ENSMUST00000083520 68 ntBASIC-0.03□□□□□ -2.41
HttP42859 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.04□□□□□ -2.42
HttP42859 Igkv13-87-201ENSMUST00000114214 286 ntBASIC-0.04□□□□□ -2.42
HttP42859 Mir3066-201ENSMUST00000175296 83 ntBASIC-0.04□□□□□ -2.42
HttP42859 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.04□□□□□ -2.42
HttP42859 Gm29516-201ENSMUST00000190402 468 ntBASIC-0.04□□□□□ -2.42
HttP42859 Gm42509-201ENSMUST00000197390 781 ntBASIC-0.04□□□□□ -2.42
HttP42859 AC158597.1-201ENSMUST00000216234 150 ntBASIC-0.04□□□□□ -2.42
HttP42859 AC162857.1-201ENSMUST00000226614 400 ntBASIC-0.04□□□□□ -2.42
HttP42859 Mir695-201ENSMUST00000102261 109 ntBASIC-0.04□□□□□ -2.42
HttP42859 Gm15381-201ENSMUST00000121501 1156 ntBASIC-0.04□□□□□ -2.42
HttP42859 Gm22016-201ENSMUST00000158793 114 ntBASIC-0.04□□□□□ -2.42
HttP42859 Gm7346-201ENSMUST00000169661 476 ntBASIC-0.04□□□□□ -2.42
HttP42859 Mir5101-201ENSMUST00000175181 83 ntBASIC-0.04□□□□□ -2.42
HttP42859 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.04□□□□□ -2.42
HttP42859 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC-0.04□□□□□ -2.42
HttP42859 Gm36956-201ENSMUST00000193830 214 ntBASIC-0.04□□□□□ -2.42
HttP42859 Gm24927-201ENSMUST00000083397 107 ntBASIC-0.04□□□□□ -2.42
HttP42859 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC-0.04□□□□□ -2.42
HttP42859 Gm23277-201ENSMUST00000157914 136 ntBASIC-0.04□□□□□ -2.42
HttP42859 Gm23208-201ENSMUST00000158666 127 ntBASIC-0.04□□□□□ -2.42
HttP42859 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.04□□□□□ -2.42
HttP42859 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC-0.04□□□□□ -2.42
HttP42859 Gm45704-201ENSMUST00000212582 403 ntBASIC-0.04□□□□□ -2.42
HttP42859 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
HttP42859 Gm29184-201ENSMUST00000190038 334 ntBASIC-0.05□□□□□ -2.42
HttP42859 Gm42625-201ENSMUST00000198611 922 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms