Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm22747-201ENSMUST00000082495 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22063-201ENSMUST00000082560 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm23057-201ENSMUST00000082801 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm26331-201ENSMUST00000082824 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24205-201ENSMUST00000082953 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm25405-201ENSMUST00000082973 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22628-201ENSMUST00000082988 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm26324-201ENSMUST00000083073 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24535-201ENSMUST00000083140 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm26496-201ENSMUST00000083150 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm26127-201ENSMUST00000083193 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24456-201ENSMUST00000083198 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24458-201ENSMUST00000083204 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24018-201ENSMUST00000083232 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm25790-201ENSMUST00000083293 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22295-201ENSMUST00000083311 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm25127-201ENSMUST00000083336 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm25583-201ENSMUST00000083413 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm25577-201ENSMUST00000083414 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24414-201ENSMUST00000083434 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24861-201ENSMUST00000083459 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24803-201ENSMUST00000083693 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm23103-201ENSMUST00000083725 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22580-201ENSMUST00000083727 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24260-201ENSMUST00000083741 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm23732-201ENSMUST00000083751 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22682-201ENSMUST00000083854 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm25869-201ENSMUST00000083855 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24693-201ENSMUST00000083885 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm26317-201ENSMUST00000083894 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22352-201ENSMUST00000083917 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm24448-201ENSMUST00000083979 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22798-201ENSMUST00000083992 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm26427-201ENSMUST00000093648 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22886-201ENSMUST00000093714 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Gm22170-201ENSMUST00000097247 107 ntBASIC2.52□□□□□ -2.01
Traf1P39428 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.52□□□□□ -2.01
Traf1P39428 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Traf1P39428 Gm12304-201ENSMUST00000120312 385 ntBASIC2.51□□□□□ -2.01
Traf1P39428 Gm14215-201ENSMUST00000120578 221 ntBASIC2.51□□□□□ -2.01
Traf1P39428 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.51□□□□□ -2.01
Traf1P39428 Gm23381-201ENSMUST00000157676 94 ntBASIC2.51□□□□□ -2.01
Traf1P39428 Gm22264-201ENSMUST00000178200 107 ntBASIC2.51□□□□□ -2.01
Traf1P39428 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Traf1P39428 Gm21729-201ENSMUST00000180058 664 ntBASIC2.51□□□□□ -2.01
Traf1P39428 Gm21853-201ENSMUST00000180071 664 ntBASIC2.51□□□□□ -2.01
Traf1P39428 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Traf1P39428 Gm27013-201ENSMUST00000182441 1024 ntBASIC2.51□□□□□ -2.01
Traf1P39428 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.51□□□□□ -2.01
Traf1P39428 Gm29495-201ENSMUST00000189319 664 ntBASIC2.51□□□□□ -2.01
Traf1P39428 Gm37119-201ENSMUST00000195691 389 ntBASIC2.51□□□□□ -2.01
Traf1P39428 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC2.51□□□□□ -2.01
Traf1P39428 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.51□□□□□ -2.01
Traf1P39428 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.51□□□□□ -2.01
Traf1P39428 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.51□□□□□ -2.01
Traf1P39428 Ear14-201ENSMUST00000049559 468 ntBASIC2.51□□□□□ -2.01
Traf1P39428 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Traf1P39428 Gm22978-201ENSMUST00000082607 160 ntBASIC2.51□□□□□ -2.01
Traf1P39428 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Traf1P39428 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.51□□□□□ -2.01
Traf1P39428 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Traf1P39428 Gm24237-201ENSMUST00000157790 132 ntBASIC2.5□□□□□ -2.01
Traf1P39428 Gm23411-201ENSMUST00000157988 62 ntBASIC2.5□□□□□ -2.01
Traf1P39428 Gm23022-201ENSMUST00000158768 180 ntBASIC2.5□□□□□ -2.01
Traf1P39428 Gm22093-201ENSMUST00000158980 111 ntBASIC2.5□□□□□ -2.01
Traf1P39428 Mir195b-201ENSMUST00000184814 97 ntBASIC2.5□□□□□ -2.01
Traf1P39428 Mir7226-201ENSMUST00000184953 60 ntBASIC2.5□□□□□ -2.01
Traf1P39428 Gm29352-201ENSMUST00000188054 544 ntBASIC2.5□□□□□ -2.01
Traf1P39428 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.5□□□□□ -2.01
Traf1P39428 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.5□□□□□ -2.01
Traf1P39428 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Traf1P39428 Gm23515-201ENSMUST00000082829 107 ntBASIC2.5□□□□□ -2.01
Traf1P39428 Gm23246-201ENSMUST00000083371 67 ntBASIC2.5□□□□□ -2.01
Traf1P39428 Mir322-201ENSMUST00000083484 95 ntBASIC2.5□□□□□ -2.01
Traf1P39428 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Traf1P39428 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.49□□□□□ -2.01
Traf1P39428 Gm23331-201ENSMUST00000157423 108 ntBASIC2.49□□□□□ -2.01
Traf1P39428 Gm26149-201ENSMUST00000157432 108 ntBASIC2.49□□□□□ -2.01
Traf1P39428 Gm27510-201ENSMUST00000158214 64 ntBASIC2.49□□□□□ -2.01
Traf1P39428 Snord11-201ENSMUST00000158468 84 ntBASIC2.49□□□□□ -2.01
Traf1P39428 Gm22891-201ENSMUST00000158641 164 ntBASIC2.49□□□□□ -2.01
Traf1P39428 Gm43739-201ENSMUST00000198294 307 ntBASIC2.49□□□□□ -2.01
Traf1P39428 Gm44181-201ENSMUST00000203106 483 ntBASIC2.49□□□□□ -2.01
Traf1P39428 Gm17990-201ENSMUST00000211728 553 ntBASIC2.49□□□□□ -2.01
Traf1P39428 Gm45730-201ENSMUST00000212560 395 ntBASIC2.49□□□□□ -2.01
Traf1P39428 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Traf1P39428 Gm26265-201ENSMUST00000083277 135 ntBASIC2.49□□□□□ -2.01
Traf1P39428 Mir222-201ENSMUST00000083537 79 ntBASIC2.49□□□□□ -2.01
Traf1P39428 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Traf1P39428 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Traf1P39428 AC163660.3-201ENSMUST00000224253 1563 ntBASIC2.49□□□□□ -2.01
Traf1P39428 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Traf1P39428 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.48□□□□□ -2.01
Traf1P39428 Gm16242-201ENSMUST00000117741 334 ntBASIC2.48□□□□□ -2.01
Traf1P39428 Gm15844-201ENSMUST00000118016 576 ntBASIC2.48□□□□□ -2.01
Traf1P39428 Gm14748-201ENSMUST00000119819 411 ntBASIC2.48□□□□□ -2.01
Traf1P39428 Gm11522-201ENSMUST00000120533 176 ntBASIC2.48□□□□□ -2.01
Traf1P39428 Gm13153-201ENSMUST00000120969 637 ntBASIC2.48□□□□□ -2.01
Traf1P39428 Gm24481-201ENSMUST00000157210 102 ntBASIC2.48□□□□□ -2.01
Traf1P39428 Gm24769-201ENSMUST00000158506 129 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms