Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm9227-201ENSMUST00000194733 566 ntBASIC1.89□□□□□ -2.11
Cd40lgP27548 Gm43510-201ENSMUST00000197922 353 ntBASIC1.89□□□□□ -2.11
Cd40lgP27548 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.89□□□□□ -2.11
Cd40lgP27548 Gm9318-201ENSMUST00000222444 438 ntBASIC1.89□□□□□ -2.11
Cd40lgP27548 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Cd40lgP27548 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Cd40lgP27548 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
Cd40lgP27548 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Cd40lgP27548 Mir743b-201ENSMUST00000104751 77 ntBASIC1.88□□□□□ -2.11
Cd40lgP27548 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC1.88□□□□□ -2.11
Cd40lgP27548 Mir8090-201ENSMUST00000185078 136 ntBASIC1.88□□□□□ -2.11
Cd40lgP27548 Mir3068-202ENSMUST00000197755 79 ntBASIC1.88□□□□□ -2.11
Cd40lgP27548 Gm5034-201ENSMUST00000199115 634 ntBASIC1.88□□□□□ -2.11
Cd40lgP27548 Gm38395-201ENSMUST00000199904 830 ntBASIC1.88□□□□□ -2.11
Cd40lgP27548 Mir7215-201ENSMUST00000200383 51 ntBASIC1.88□□□□□ -2.11
Cd40lgP27548 Gm44446-201ENSMUST00000204864 255 ntBASIC1.88□□□□□ -2.11
Cd40lgP27548 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.88□□□□□ -2.11
Cd40lgP27548 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.88□□□□□ -2.11
Cd40lgP27548 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.88□□□□□ -2.11
Cd40lgP27548 Gm18617-201ENSMUST00000222311 259 ntBASIC1.88□□□□□ -2.11
Cd40lgP27548 AC162857.1-201ENSMUST00000226614 400 ntBASIC1.88□□□□□ -2.11
Cd40lgP27548 Mir301-201ENSMUST00000083655 86 ntBASIC1.88□□□□□ -2.11
Cd40lgP27548 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
Cd40lgP27548 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Cd40lgP27548 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.88□□□□□ -2.11
Cd40lgP27548 Gm12255-201ENSMUST00000117184 284 ntBASIC1.87□□□□□ -2.11
Cd40lgP27548 Gm15215-201ENSMUST00000117773 489 ntBASIC1.87□□□□□ -2.11
Cd40lgP27548 Gm15281-201ENSMUST00000125181 351 ntBASIC1.87□□□□□ -2.11
Cd40lgP27548 Gm15899-201ENSMUST00000128586 238 ntBASIC1.87□□□□□ -2.11
Cd40lgP27548 Gm26102-201ENSMUST00000157251 284 ntBASIC1.87□□□□□ -2.11
Cd40lgP27548 Gm24783-201ENSMUST00000157639 100 ntBASIC1.87□□□□□ -2.11
Cd40lgP27548 Gm27396-201ENSMUST00000157708 58 ntBASIC1.87□□□□□ -2.11
Cd40lgP27548 Gm23641-201ENSMUST00000157857 101 ntBASIC1.87□□□□□ -2.11
Cd40lgP27548 Gm25658-201ENSMUST00000158472 128 ntBASIC1.87□□□□□ -2.11
Cd40lgP27548 Gm23548-201ENSMUST00000158963 106 ntBASIC1.87□□□□□ -2.11
Cd40lgP27548 Gm7925-201ENSMUST00000166690 401 ntBASIC1.87□□□□□ -2.11
Cd40lgP27548 Mir6997-201ENSMUST00000184313 71 ntBASIC1.87□□□□□ -2.11
Cd40lgP27548 Mir7226-201ENSMUST00000184953 60 ntBASIC1.87□□□□□ -2.11
Cd40lgP27548 Gm28489-201ENSMUST00000186655 316 ntBASIC1.87□□□□□ -2.11
Cd40lgP27548 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.87□□□□□ -2.11
Cd40lgP27548 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.87□□□□□ -2.11
Cd40lgP27548 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.87□□□□□ -2.11
Cd40lgP27548 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.86□□□□□ -2.11
Cd40lgP27548 Gm23202-201ENSMUST00000104376 129 ntBASIC1.86□□□□□ -2.11
Cd40lgP27548 Gm7164-201ENSMUST00000117503 450 ntBASIC1.86□□□□□ -2.11
Cd40lgP27548 Gm16242-201ENSMUST00000117741 334 ntBASIC1.86□□□□□ -2.11
Cd40lgP27548 Gm23829-201ENSMUST00000157392 270 ntBASIC1.86□□□□□ -2.11
Cd40lgP27548 Gm22328-201ENSMUST00000158074 112 ntBASIC1.86□□□□□ -2.11
Cd40lgP27548 Gm24498-201ENSMUST00000158445 102 ntBASIC1.86□□□□□ -2.11
Cd40lgP27548 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.86□□□□□ -2.11
Cd40lgP27548 Mir7016-201ENSMUST00000184308 72 ntBASIC1.86□□□□□ -2.11
Cd40lgP27548 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1.86□□□□□ -2.11
Cd40lgP27548 Gm43680-201ENSMUST00000199466 340 ntBASIC1.86□□□□□ -2.11
Cd40lgP27548 Gm44024-201ENSMUST00000203008 476 ntBASIC1.86□□□□□ -2.11
Cd40lgP27548 Gm18453-201ENSMUST00000208000 626 ntBASIC1.86□□□□□ -2.11
Cd40lgP27548 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.86□□□□□ -2.11
Cd40lgP27548 CT025526.1-201ENSMUST00000217327 267 ntBASIC1.86□□□□□ -2.11
Cd40lgP27548 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.86□□□□□ -2.11
Cd40lgP27548 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.86□□□□□ -2.11
Cd40lgP27548 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.86□□□□□ -2.11
Cd40lgP27548 Gm24151-201ENSMUST00000082758 141 ntBASIC1.86□□□□□ -2.11
Cd40lgP27548 Snora69-201ENSMUST00000083708 131 ntBASIC1.86□□□□□ -2.11
Cd40lgP27548 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC1.86□□□□□ -2.11
Cd40lgP27548 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Cd40lgP27548 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Cd40lgP27548 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.86□□□□□ -2.11
Cd40lgP27548 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Cd40lgP27548 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Cd40lgP27548 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Cd40lgP27548 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Cd40lgP27548 Gm13378-201ENSMUST00000117483 336 ntBASIC1.85□□□□□ -2.11
Cd40lgP27548 Cox20-ps-201ENSMUST00000119872 353 ntBASIC1.85□□□□□ -2.11
Cd40lgP27548 Gm13588-201ENSMUST00000120026 135 ntBASIC1.85□□□□□ -2.11
Cd40lgP27548 Gm13153-201ENSMUST00000120969 637 ntBASIC1.85□□□□□ -2.11
Cd40lgP27548 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.85□□□□□ -2.11
Cd40lgP27548 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.85□□□□□ -2.11
Cd40lgP27548 Gm25113-201ENSMUST00000157185 143 ntBASIC1.85□□□□□ -2.11
Cd40lgP27548 Gm26149-201ENSMUST00000157432 108 ntBASIC1.85□□□□□ -2.11
Cd40lgP27548 Gm25488-201ENSMUST00000158728 118 ntBASIC1.85□□□□□ -2.11
Cd40lgP27548 Gm27013-201ENSMUST00000182441 1024 ntBASIC1.85□□□□□ -2.11
Cd40lgP27548 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.85□□□□□ -2.11
Cd40lgP27548 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Cd40lgP27548 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC1.85□□□□□ -2.11
Cd40lgP27548 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.85□□□□□ -2.11
Cd40lgP27548 Gm44726-201ENSMUST00000203427 217 ntBASIC1.85□□□□□ -2.11
Cd40lgP27548 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.85□□□□□ -2.11
Cd40lgP27548 Gm45402-201ENSMUST00000211796 223 ntBASIC1.85□□□□□ -2.11
Cd40lgP27548 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.85□□□□□ -2.11
Cd40lgP27548 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.85□□□□□ -2.11
Cd40lgP27548 AC131720.2-201ENSMUST00000220420 431 ntBASIC1.85□□□□□ -2.11
Cd40lgP27548 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Cd40lgP27548 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.85□□□□□ -2.11
Cd40lgP27548 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Cd40lgP27548 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Cd40lgP27548 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.84□□□□□ -2.11
Cd40lgP27548 Gm23951-201ENSMUST00000104029 132 ntBASIC1.84□□□□□ -2.11
Cd40lgP27548 Gm24596-201ENSMUST00000122504 107 ntBASIC1.84□□□□□ -2.11
Cd40lgP27548 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.84□□□□□ -2.11
Cd40lgP27548 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.84□□□□□ -2.11
Cd40lgP27548 Gm24409-201ENSMUST00000157881 152 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms