Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm22800-201ENSMUST00000175627 94 ntBASIC1.71□□□□□ -2.14
P20040 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
P20040 Mir6379-201ENSMUST00000183392 115 ntBASIC1.71□□□□□ -2.14
P20040 Gm27385-201ENSMUST00000184747 104 ntBASIC1.71□□□□□ -2.14
P20040 Gm29350-201ENSMUST00000189141 541 ntBASIC1.71□□□□□ -2.14
P20040 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.71□□□□□ -2.14
P20040 Gm44336-201ENSMUST00000203696 468 ntBASIC1.71□□□□□ -2.14
P20040 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.71□□□□□ -2.14
P20040 Gm45386-201ENSMUST00000210194 218 ntBASIC1.71□□□□□ -2.14
P20040 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.71□□□□□ -2.14
P20040 Gm26126-201ENSMUST00000083188 164 ntBASIC1.71□□□□□ -2.14
P20040 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.71□□□□□ -2.14
P20040 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
P20040 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
P20040 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.7□□□□□ -2.14
P20040 n-R5s207-201ENSMUST00000122497 118 ntBASIC1.7□□□□□ -2.14
P20040 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
P20040 Mir28b-201ENSMUST00000175399 80 ntBASIC1.7□□□□□ -2.14
P20040 Gm25933-201ENSMUST00000178943 108 ntBASIC1.7□□□□□ -2.14
P20040 Mir6995-201ENSMUST00000183658 71 ntBASIC1.7□□□□□ -2.14
P20040 Mir6355-201ENSMUST00000183687 106 ntBASIC1.7□□□□□ -2.14
P20040 Gm27957-201ENSMUST00000184054 127 ntBASIC1.7□□□□□ -2.14
P20040 Mir6997-201ENSMUST00000184313 71 ntBASIC1.7□□□□□ -2.14
P20040 Gm27919-201ENSMUST00000185163 107 ntBASIC1.7□□□□□ -2.14
P20040 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.7□□□□□ -2.14
P20040 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.7□□□□□ -2.14
P20040 Gm37923-201ENSMUST00000191624 161 ntBASIC1.7□□□□□ -2.14
P20040 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.7□□□□□ -2.14
P20040 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.7□□□□□ -2.14
P20040 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.7□□□□□ -2.14
P20040 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.7□□□□□ -2.14
P20040 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.7□□□□□ -2.14
P20040 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
P20040 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
P20040 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
P20040 Mir301-201ENSMUST00000083655 86 ntBASIC1.7□□□□□ -2.14
P20040 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.7□□□□□ -2.14
P20040 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
P20040 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.7□□□□□ -2.14
P20040 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
P20040 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.69□□□□□ -2.14
P20040 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
P20040 Gm7164-201ENSMUST00000117503 450 ntBASIC1.69□□□□□ -2.14
P20040 Gm14624-201ENSMUST00000117746 192 ntBASIC1.69□□□□□ -2.14
P20040 Gm11991-201ENSMUST00000119652 1074 ntBASIC1.69□□□□□ -2.14
P20040 Gm26393-201ENSMUST00000157625 129 ntBASIC1.69□□□□□ -2.14
P20040 Gm24438-201ENSMUST00000157893 115 ntBASIC1.69□□□□□ -2.14
P20040 Gm25658-201ENSMUST00000158472 128 ntBASIC1.69□□□□□ -2.14
P20040 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.69□□□□□ -2.14
P20040 Gm23523-201ENSMUST00000180190 107 ntBASIC1.69□□□□□ -2.14
P20040 Gm27443-201ENSMUST00000184660 98 ntBASIC1.69□□□□□ -2.14
P20040 Gm27624-201ENSMUST00000185047 177 ntBASIC1.69□□□□□ -2.14
P20040 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC1.69□□□□□ -2.14
P20040 Gm37550-201ENSMUST00000193230 463 ntBASIC1.69□□□□□ -2.14
P20040 Gm25820-202ENSMUST00000197479 128 ntBASIC1.69□□□□□ -2.14
P20040 Gm43676-201ENSMUST00000197532 540 ntBASIC1.69□□□□□ -2.14
P20040 Gm43739-201ENSMUST00000198294 307 ntBASIC1.69□□□□□ -2.14
P20040 Gm44881-201ENSMUST00000205425 367 ntBASIC1.69□□□□□ -2.14
P20040 Gm44533-201ENSMUST00000207782 268 ntBASIC1.69□□□□□ -2.14
P20040 Gm44564-201ENSMUST00000207985 180 ntBASIC1.69□□□□□ -2.14
P20040 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.69□□□□□ -2.14
P20040 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.69□□□□□ -2.14
P20040 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.69□□□□□ -2.14
P20040 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.69□□□□□ -2.14
P20040 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.69□□□□□ -2.14
P20040 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
P20040 Gm23462-201ENSMUST00000083264 104 ntBASIC1.69□□□□□ -2.14
P20040 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
P20040 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
P20040 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
P20040 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
P20040 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
P20040 Mir743b-201ENSMUST00000104751 77 ntBASIC1.68□□□□□ -2.14
P20040 Gm16328-201ENSMUST00000126985 196 ntBASIC1.68□□□□□ -2.14
P20040 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.68□□□□□ -2.14
P20040 Gm26278-201ENSMUST00000157098 132 ntBASIC1.68□□□□□ -2.14
P20040 Gm22841-201ENSMUST00000158443 62 ntBASIC1.68□□□□□ -2.14
P20040 Gm25051-201ENSMUST00000158602 249 ntBASIC1.68□□□□□ -2.14
P20040 Gm23379-201ENSMUST00000180026 107 ntBASIC1.68□□□□□ -2.14
P20040 Gm27544-201ENSMUST00000185069 155 ntBASIC1.68□□□□□ -2.14
P20040 Gm29073-201ENSMUST00000185563 664 ntBASIC1.68□□□□□ -2.14
P20040 Gm29134-201ENSMUST00000186579 126 ntBASIC1.68□□□□□ -2.14
P20040 Gm28437-201ENSMUST00000190277 783 ntBASIC1.68□□□□□ -2.14
P20040 Gm28337-201ENSMUST00000190425 666 ntBASIC1.68□□□□□ -2.14
P20040 Gm29165-201ENSMUST00000190655 664 ntBASIC1.68□□□□□ -2.14
P20040 Gm29211-201ENSMUST00000191470 664 ntBASIC1.68□□□□□ -2.14
P20040 Gm31123-201ENSMUST00000192094 666 ntBASIC1.68□□□□□ -2.14
P20040 Gm44446-201ENSMUST00000204864 255 ntBASIC1.68□□□□□ -2.14
P20040 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.68□□□□□ -2.14
P20040 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.68□□□□□ -2.14
P20040 Gm25124-201ENSMUST00000083345 164 ntBASIC1.68□□□□□ -2.14
P20040 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
P20040 Gm16242-201ENSMUST00000117741 334 ntBASIC1.67□□□□□ -2.14
P20040 Gm24596-201ENSMUST00000122504 107 ntBASIC1.67□□□□□ -2.14
P20040 Gm24584-201ENSMUST00000157972 107 ntBASIC1.67□□□□□ -2.14
P20040 Gm25211-201ENSMUST00000177553 107 ntBASIC1.67□□□□□ -2.14
P20040 Gm24540-201ENSMUST00000177627 107 ntBASIC1.67□□□□□ -2.14
P20040 Gm25256-201ENSMUST00000177746 107 ntBASIC1.67□□□□□ -2.14
P20040 Gm22822-201ENSMUST00000177941 107 ntBASIC1.67□□□□□ -2.14
P20040 Rnu6-201ENSMUST00000178023 107 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms