Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm22907-201ENSMUST00000175198 126 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm22625-201ENSMUST00000175382 126 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm22875-201ENSMUST00000175449 126 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm25197-201ENSMUST00000175516 126 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm27857-201ENSMUST00000176930 126 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm26268-201ENSMUST00000177685 126 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm23681-201ENSMUST00000178821 126 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm25253-201ENSMUST00000179958 107 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm27668-201ENSMUST00000184188 120 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm27249-201ENSMUST00000185049 328 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm37281-201ENSMUST00000192412 439 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm8790-201ENSMUST00000194108 322 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm44376-201ENSMUST00000197570 128 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Mir3068-202ENSMUST00000197755 79 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm44564-201ENSMUST00000207985 180 ntBASIC4.09□□□□□ -1.75
Msx1P13297 AC147101.2-201ENSMUST00000219756 184 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.09□□□□□ -1.75
Msx1P13297 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Mir202-201ENSMUST00000083568 72 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Msx1P13297 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Msx1P13297 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.09□□□□□ -1.75
Msx1P13297 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Msx1P13297 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
Msx1P13297 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Msx1P13297 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Msx1P13297 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Msx1P13297 Gm14416-201ENSMUST00000118630 2308 ntBASIC4.09□□□□□ -1.76
Msx1P13297 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.08□□□□□ -1.76
Msx1P13297 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.08□□□□□ -1.76
Msx1P13297 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
Msx1P13297 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.08□□□□□ -1.76
Msx1P13297 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Msx1P13297 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Msx1P13297 Gm23202-201ENSMUST00000104376 129 ntBASIC4.08□□□□□ -1.76
Msx1P13297 Gm22281-201ENSMUST00000157198 103 ntBASIC4.08□□□□□ -1.76
Msx1P13297 Gm23535-201ENSMUST00000157542 106 ntBASIC4.08□□□□□ -1.76
Msx1P13297 Gm24842-201ENSMUST00000158681 54 ntBASIC4.08□□□□□ -1.76
Msx1P13297 Mir1936-201ENSMUST00000158699 93 ntBASIC4.08□□□□□ -1.76
Msx1P13297 Gm27934-201ENSMUST00000158795 63 ntBASIC4.08□□□□□ -1.76
Msx1P13297 Gm25369-201ENSMUST00000158848 132 ntBASIC4.08□□□□□ -1.76
Msx1P13297 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Msx1P13297 Gm27940-201ENSMUST00000184449 98 ntBASIC4.08□□□□□ -1.76
Msx1P13297 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.08□□□□□ -1.76
Msx1P13297 Gm45162-201ENSMUST00000209013 618 ntBASIC4.08□□□□□ -1.76
Msx1P13297 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Msx1P13297 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Msx1P13297 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Msx1P13297 Gm46998-201ENSMUST00000221444 330 ntBASIC4.08□□□□□ -1.76
Msx1P13297 CT030687.1-201ENSMUST00000221854 162 ntBASIC4.08□□□□□ -1.76
Msx1P13297 Gm23244-201ENSMUST00000083375 92 ntBASIC4.08□□□□□ -1.76
Msx1P13297 Mir29b-2-201ENSMUST00000083478 81 ntBASIC4.08□□□□□ -1.76
Msx1P13297 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
Msx1P13297 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Msx1P13297 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.08□□□□□ -1.76
Msx1P13297 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Msx1P13297 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Msx1P13297 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Msx1P13297 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Msx1P13297 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Msx1P13297 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
Msx1P13297 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Msx1P13297 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.07□□□□□ -1.76
Msx1P13297 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Msx1P13297 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Msx1P13297 Gm10552-201ENSMUST00000113396 372 ntBASIC4.07□□□□□ -1.76
Msx1P13297 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Msx1P13297 Gm10444-201ENSMUST00000126708 148 ntBASIC4.07□□□□□ -1.76
Msx1P13297 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC4.07□□□□□ -1.76
Msx1P13297 Gm24505-201ENSMUST00000157682 126 ntBASIC4.07□□□□□ -1.76
Msx1P13297 Gm24998-201ENSMUST00000157908 89 ntBASIC4.07□□□□□ -1.76
Msx1P13297 Gm18665-201ENSMUST00000189783 270 ntBASIC4.07□□□□□ -1.76
Msx1P13297 Mir132-201ENSMUST00000083603 66 ntBASIC4.07□□□□□ -1.76
Msx1P13297 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Msx1P13297 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.07□□□□□ -1.76
Msx1P13297 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Msx1P13297 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Msx1P13297 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Msx1P13297 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Msx1P13297 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Msx1P13297 Gm12173-201ENSMUST00000117622 273 ntBASIC4.06□□□□□ -1.76
Msx1P13297 Gm26091-201ENSMUST00000122704 82 ntBASIC4.06□□□□□ -1.76
Msx1P13297 Gm23718-201ENSMUST00000157350 307 ntBASIC4.06□□□□□ -1.76
Msx1P13297 Gm24601-201ENSMUST00000157970 143 ntBASIC4.06□□□□□ -1.76
Msx1P13297 Gm16289-201ENSMUST00000162079 183 ntBASIC4.06□□□□□ -1.76
Msx1P13297 Gm20438-201ENSMUST00000174441 329 ntBASIC4.06□□□□□ -1.76
Msx1P13297 Gm23053-201ENSMUST00000175136 96 ntBASIC4.06□□□□□ -1.76
Msx1P13297 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Msx1P13297 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Msx1P13297 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.06□□□□□ -1.76
Msx1P13297 Mir6537-201ENSMUST00000184150 110 ntBASIC4.06□□□□□ -1.76
Msx1P13297 Gm19774-201ENSMUST00000190667 114 ntBASIC4.06□□□□□ -1.76
Msx1P13297 Gm37050-201ENSMUST00000193464 466 ntBASIC4.06□□□□□ -1.76
Msx1P13297 Gm44354-201ENSMUST00000196017 143 ntBASIC4.06□□□□□ -1.76
Msx1P13297 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.06□□□□□ -1.76
Msx1P13297 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC4.06□□□□□ -1.76
Msx1P13297 Gm11351-202ENSMUST00000225724 478 ntBASIC4.06□□□□□ -1.76
Msx1P13297 AC164100.1-201ENSMUST00000227214 508 ntBASIC4.06□□□□□ -1.76
Msx1P13297 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Msx1P13297 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms