Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RaraP11416 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.94□□□□□ -1.78
RaraP11416 Gm22816-201ENSMUST00000157450 117 ntBASIC3.94□□□□□ -1.78
RaraP11416 Gm22476-201ENSMUST00000158902 100 ntBASIC3.94□□□□□ -1.78
RaraP11416 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RaraP11416 Gm5175-202ENSMUST00000219699 529 ntBASIC3.94□□□□□ -1.78
RaraP11416 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.94□□□□□ -1.78
RaraP11416 Gm25634-201ENSMUST00000082667 105 ntBASIC3.94□□□□□ -1.78
RaraP11416 Gm26456-201ENSMUST00000082831 111 ntBASIC3.94□□□□□ -1.78
RaraP11416 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RaraP11416 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.94□□□□□ -1.78
RaraP11416 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
RaraP11416 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RaraP11416 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
RaraP11416 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RaraP11416 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
RaraP11416 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.93□□□□□ -1.78
RaraP11416 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.93□□□□□ -1.78
RaraP11416 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RaraP11416 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RaraP11416 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
RaraP11416 Gm23273-201ENSMUST00000104058 135 ntBASIC3.93□□□□□ -1.78
RaraP11416 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.93□□□□□ -1.78
RaraP11416 Gm22349-201ENSMUST00000157864 107 ntBASIC3.93□□□□□ -1.78
RaraP11416 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RaraP11416 Gm28344-201ENSMUST00000185704 279 ntBASIC3.93□□□□□ -1.78
RaraP11416 Gm6947-201ENSMUST00000186254 78 ntBASIC3.93□□□□□ -1.78
RaraP11416 Gm18429-201ENSMUST00000198707 421 ntBASIC3.93□□□□□ -1.78
RaraP11416 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.93□□□□□ -1.78
RaraP11416 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RaraP11416 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.93□□□□□ -1.78
RaraP11416 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.93□□□□□ -1.78
RaraP11416 Gm18617-201ENSMUST00000222311 259 ntBASIC3.93□□□□□ -1.78
RaraP11416 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RaraP11416 Gm24355-201ENSMUST00000082858 122 ntBASIC3.93□□□□□ -1.78
RaraP11416 Mir208a-201ENSMUST00000083498 83 ntBASIC3.93□□□□□ -1.78
RaraP11416 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
RaraP11416 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
RaraP11416 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.92□□□□□ -1.78
RaraP11416 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RaraP11416 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RaraP11416 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.92□□□□□ -1.78
RaraP11416 Gm23053-201ENSMUST00000175136 96 ntBASIC3.92□□□□□ -1.78
RaraP11416 Gm29603-201ENSMUST00000186792 334 ntBASIC3.92□□□□□ -1.78
RaraP11416 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.92□□□□□ -1.78
RaraP11416 Gm7449-201ENSMUST00000194393 663 ntBASIC3.92□□□□□ -1.78
RaraP11416 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.92□□□□□ -1.78
RaraP11416 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.92□□□□□ -1.78
RaraP11416 Gm26165-201ENSMUST00000083791 138 ntBASIC3.92□□□□□ -1.78
RaraP11416 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
RaraP11416 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RaraP11416 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
RaraP11416 Gm17113-201ENSMUST00000170118 171 ntBASIC3.91□□□□□ -1.78
RaraP11416 Mir5710-201ENSMUST00000176884 69 ntBASIC3.91□□□□□ -1.78
RaraP11416 Gm37343-201ENSMUST00000192542 111 ntBASIC3.91□□□□□ -1.78
RaraP11416 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.91□□□□□ -1.78
RaraP11416 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RaraP11416 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RaraP11416 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.91□□□□□ -1.78
RaraP11416 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.91□□□□□ -1.78
RaraP11416 Gm26327-201ENSMUST00000093724 111 ntBASIC3.91□□□□□ -1.78
RaraP11416 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RaraP11416 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RaraP11416 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RaraP11416 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.91□□□□□ -1.78
RaraP11416 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.9□□□□□ -1.78
RaraP11416 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
RaraP11416 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
RaraP11416 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RaraP11416 Gm15282-201ENSMUST00000117707 300 ntBASIC3.9□□□□□ -1.79
RaraP11416 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.9□□□□□ -1.79
RaraP11416 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.9□□□□□ -1.79
RaraP11416 Gm27189-201ENSMUST00000184119 190 ntBASIC3.9□□□□□ -1.79
RaraP11416 Gm29005-201ENSMUST00000186773 320 ntBASIC3.9□□□□□ -1.79
RaraP11416 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.9□□□□□ -1.79
RaraP11416 Gm33866-201ENSMUST00000196911 289 ntBASIC3.9□□□□□ -1.79
RaraP11416 Gm42855-201ENSMUST00000197388 253 ntBASIC3.9□□□□□ -1.79
RaraP11416 Gm5358-201ENSMUST00000212814 353 ntBASIC3.9□□□□□ -1.79
RaraP11416 Gm18502-201ENSMUST00000218679 199 ntBASIC3.9□□□□□ -1.79
RaraP11416 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.9□□□□□ -1.79
RaraP11416 Gm22970-201ENSMUST00000083304 186 ntBASIC3.9□□□□□ -1.79
RaraP11416 Gm23095-201ENSMUST00000083446 107 ntBASIC3.9□□□□□ -1.79
RaraP11416 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.9□□□□□ -1.79
RaraP11416 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
RaraP11416 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RaraP11416 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RaraP11416 Gm2869-201ENSMUST00000124359 2621 ntBASIC3.89□□□□□ -1.79
RaraP11416 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
RaraP11416 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RaraP11416 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.89□□□□□ -1.79
RaraP11416 Gm6762-201ENSMUST00000121769 289 ntBASIC3.89□□□□□ -1.79
RaraP11416 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.89□□□□□ -1.79
RaraP11416 Gm26219-201ENSMUST00000175216 71 ntBASIC3.89□□□□□ -1.79
RaraP11416 Mir5127-201ENSMUST00000175295 71 ntBASIC3.89□□□□□ -1.79
RaraP11416 Gm27903-201ENSMUST00000175482 126 ntBASIC3.89□□□□□ -1.79
RaraP11416 Gm44352-201ENSMUST00000196358 110 ntBASIC3.89□□□□□ -1.79
RaraP11416 CT025689.3-201ENSMUST00000223817 301 ntBASIC3.89□□□□□ -1.79
RaraP11416 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.89□□□□□ -1.79
RaraP11416 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RaraP11416 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 157.4 ms