Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm19898-201ENSMUST00000177490 251 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Mir6414-201ENSMUST00000183685 82 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Hoxd3P09027 Gm37431-201ENSMUST00000195102 111 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Gm42739-201ENSMUST00000200687 226 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.39□□□□□ -1.87
Hoxd3P09027 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC3.39□□□□□ -1.87
Hoxd3P09027 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Mir383-201ENSMUST00000083523 70 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Mir218-1-201ENSMUST00000083669 110 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.39□□□□□ -1.87
Hoxd3P09027 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Hoxd3P09027 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
Hoxd3P09027 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.39□□□□□ -1.87
Hoxd3P09027 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Hoxd3P09027 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
Hoxd3P09027 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Hoxd3P09027 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Hoxd3P09027 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.38□□□□□ -1.87
Hoxd3P09027 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Hoxd3P09027 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Hoxd3P09027 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Hoxd3P09027 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Hoxd3P09027 Mir676-201ENSMUST00000102443 89 ntBASIC3.38□□□□□ -1.87
Hoxd3P09027 Gm23907-201ENSMUST00000104595 189 ntBASIC3.38□□□□□ -1.87
Hoxd3P09027 Gm22679-201ENSMUST00000116975 100 ntBASIC3.38□□□□□ -1.87
Hoxd3P09027 Gm22211-201ENSMUST00000158097 156 ntBASIC3.38□□□□□ -1.87
Hoxd3P09027 Gm16289-201ENSMUST00000162079 183 ntBASIC3.38□□□□□ -1.87
Hoxd3P09027 Mir3104-201ENSMUST00000174911 63 ntBASIC3.38□□□□□ -1.87
Hoxd3P09027 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.38□□□□□ -1.87
Hoxd3P09027 Gm43155-201ENSMUST00000202661 494 ntBASIC3.38□□□□□ -1.87
Hoxd3P09027 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC3.38□□□□□ -1.87
Hoxd3P09027 Gm8219-201ENSMUST00000218309 242 ntBASIC3.38□□□□□ -1.87
Hoxd3P09027 Gm25851-201ENSMUST00000082794 107 ntBASIC3.38□□□□□ -1.87
Hoxd3P09027 Mir137-201ENSMUST00000083635 73 ntBASIC3.38□□□□□ -1.87
Hoxd3P09027 Gm44177-201ENSMUST00000204338 2667 ntBASIC3.38□□□□□ -1.87
Hoxd3P09027 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Hoxd3P09027 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Hoxd3P09027 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Hoxd3P09027 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Hoxd3P09027 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Hoxd3P09027 Gm44542-201ENSMUST00000208677 4314 ntBASIC3.38□□□□□ -1.87
Hoxd3P09027 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Hoxd3P09027 AC153964.1-201ENSMUST00000219677 3142 ntBASIC3.37□□□□□ -1.87
Hoxd3P09027 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.37□□□□□ -1.87
Hoxd3P09027 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Hoxd3P09027 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC3.37□□□□□ -1.87
Hoxd3P09027 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.37□□□□□ -1.87
Hoxd3P09027 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Hoxd3P09027 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Hoxd3P09027 Gm25107-201ENSMUST00000122472 129 ntBASIC3.37□□□□□ -1.87
Hoxd3P09027 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.37□□□□□ -1.87
Hoxd3P09027 Gm23702-201ENSMUST00000158840 130 ntBASIC3.37□□□□□ -1.87
Hoxd3P09027 Gm27457-201ENSMUST00000184771 156 ntBASIC3.37□□□□□ -1.87
Hoxd3P09027 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.37□□□□□ -1.87
Hoxd3P09027 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC3.37□□□□□ -1.87
Hoxd3P09027 Gm43206-201ENSMUST00000197990 114 ntBASIC3.37□□□□□ -1.87
Hoxd3P09027 Gm44879-201ENSMUST00000207007 503 ntBASIC3.37□□□□□ -1.87
Hoxd3P09027 Mir346-201ENSMUST00000083547 98 ntBASIC3.37□□□□□ -1.87
Hoxd3P09027 Gm24697-201ENSMUST00000083881 107 ntBASIC3.37□□□□□ -1.87
Hoxd3P09027 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Hoxd3P09027 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Hoxd3P09027 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Hoxd3P09027 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
Hoxd3P09027 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Hoxd3P09027 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.36□□□□□ -1.87
Hoxd3P09027 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Hoxd3P09027 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.36□□□□□ -1.87
Hoxd3P09027 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Hoxd3P09027 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Hoxd3P09027 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Hoxd3P09027 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Hoxd3P09027 Gm14973-201ENSMUST00000117248 255 ntBASIC3.36□□□□□ -1.87
Hoxd3P09027 Gm14473-201ENSMUST00000122269 557 ntBASIC3.36□□□□□ -1.87
Hoxd3P09027 Gm23098-201ENSMUST00000157552 299 ntBASIC3.36□□□□□ -1.87
Hoxd3P09027 Gm25427-201ENSMUST00000157605 103 ntBASIC3.36□□□□□ -1.87
Hoxd3P09027 Gm26187-201ENSMUST00000157693 101 ntBASIC3.36□□□□□ -1.87
Hoxd3P09027 Gm25882-201ENSMUST00000157784 85 ntBASIC3.36□□□□□ -1.87
Hoxd3P09027 Gm25369-201ENSMUST00000158848 132 ntBASIC3.36□□□□□ -1.87
Hoxd3P09027 Gm23476-201ENSMUST00000158881 274 ntBASIC3.36□□□□□ -1.87
Hoxd3P09027 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Hoxd3P09027 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Hoxd3P09027 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.36□□□□□ -1.87
Hoxd3P09027 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC3.36□□□□□ -1.87
Hoxd3P09027 Mir3620-201ENSMUST00000184710 61 ntBASIC3.36□□□□□ -1.87
Hoxd3P09027 Gm44564-201ENSMUST00000207985 180 ntBASIC3.36□□□□□ -1.87
Hoxd3P09027 Gm23928-201ENSMUST00000082469 145 ntBASIC3.36□□□□□ -1.87
Hoxd3P09027 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.36□□□□□ -1.87
Hoxd3P09027 Gm24625-201ENSMUST00000082622 130 ntBASIC3.36□□□□□ -1.87
Hoxd3P09027 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.36□□□□□ -1.87
Hoxd3P09027 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.36□□□□□ -1.87
Hoxd3P09027 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Hoxd3P09027 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC3.36□□□□□ -1.87
Hoxd3P09027 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.36□□□□□ -1.87
Hoxd3P09027 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Hoxd3P09027 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Hoxd3P09027 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 870.7 ms