Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
P06344 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
P06344 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.99□□□□□ -2.09
P06344 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
P06344 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC1.98□□□□□ -2.09
P06344 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
P06344 Mir344e-201ENSMUST00000104677 66 ntBASIC1.98□□□□□ -2.09
P06344 Gm14287-201ENSMUST00000121060 117 ntBASIC1.98□□□□□ -2.09
P06344 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.98□□□□□ -2.09
P06344 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.98□□□□□ -2.09
P06344 Gm22328-201ENSMUST00000158074 112 ntBASIC1.98□□□□□ -2.09
P06344 Gm23476-201ENSMUST00000158881 274 ntBASIC1.98□□□□□ -2.09
P06344 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.98□□□□□ -2.09
P06344 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.98□□□□□ -2.09
P06344 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC1.98□□□□□ -2.09
P06344 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.98□□□□□ -2.09
P06344 Gm18291-201ENSMUST00000190791 301 ntBASIC1.98□□□□□ -2.09
P06344 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.98□□□□□ -2.09
P06344 Gm43587-201ENSMUST00000199590 204 ntBASIC1.98□□□□□ -2.09
P06344 Gm17990-201ENSMUST00000211728 553 ntBASIC1.98□□□□□ -2.09
P06344 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.98□□□□□ -2.09
P06344 Gm45730-201ENSMUST00000212560 395 ntBASIC1.98□□□□□ -2.09
P06344 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.98□□□□□ -2.09
P06344 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.98□□□□□ -2.09
P06344 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.98□□□□□ -2.09
P06344 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.98□□□□□ -2.09
P06344 AC124104.1-201ENSMUST00000226279 417 ntBASIC1.98□□□□□ -2.09
P06344 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.98□□□□□ -2.09
P06344 Gm9174-201ENSMUST00000078149 255 ntBASIC1.98□□□□□ -2.09
P06344 Gm25796-201ENSMUST00000082645 163 ntBASIC1.98□□□□□ -2.09
P06344 Gm25130-201ENSMUST00000082650 156 ntBASIC1.98□□□□□ -2.09
P06344 Gm25579-201ENSMUST00000083407 106 ntBASIC1.98□□□□□ -2.09
P06344 Gm3867-201ENSMUST00000086108 279 ntBASIC1.98□□□□□ -2.09
P06344 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
P06344 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
P06344 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
P06344 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.97□□□□□ -2.09
P06344 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
P06344 Gm23202-201ENSMUST00000104376 129 ntBASIC1.97□□□□□ -2.09
P06344 Gm12550-201ENSMUST00000118478 329 ntBASIC1.97□□□□□ -2.09
P06344 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.97□□□□□ -2.09
P06344 Gm12721-201ENSMUST00000120621 268 ntBASIC1.97□□□□□ -2.09
P06344 Gm25910-201ENSMUST00000157620 140 ntBASIC1.97□□□□□ -2.09
P06344 Gm16326-201ENSMUST00000162843 414 ntBASIC1.97□□□□□ -2.09
P06344 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.97□□□□□ -2.09
P06344 Gm24084-201ENSMUST00000175173 137 ntBASIC1.97□□□□□ -2.09
P06344 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.97□□□□□ -2.09
P06344 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.97□□□□□ -2.09
P06344 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
P06344 Gm27588-201ENSMUST00000185096 263 ntBASIC1.97□□□□□ -2.09
P06344 Mir3068-202ENSMUST00000197755 79 ntBASIC1.97□□□□□ -2.09
P06344 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.97□□□□□ -2.09
P06344 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.97□□□□□ -2.09
P06344 AC154600.1-201ENSMUST00000226480 714 ntBASIC1.97□□□□□ -2.09
P06344 AC123533.1-201ENSMUST00000227782 446 ntBASIC1.97□□□□□ -2.09
P06344 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
P06344 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
P06344 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
P06344 AC125374.3-201ENSMUST00000214983 2810 ntBASIC1.97□□□□□ -2.09
P06344 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.09
P06344 AC153526.2-201ENSMUST00000218206 2031 ntBASIC1.96□□□□□ -2.09
P06344 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.96□□□□□ -2.1
P06344 Gm15536-201ENSMUST00000121411 114 ntBASIC1.96□□□□□ -2.1
P06344 Gm22227-201ENSMUST00000157356 259 ntBASIC1.96□□□□□ -2.1
P06344 Gm24769-201ENSMUST00000158506 129 ntBASIC1.96□□□□□ -2.1
P06344 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.96□□□□□ -2.1
P06344 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC1.96□□□□□ -2.1
P06344 Gm24304-201ENSMUST00000177635 107 ntBASIC1.96□□□□□ -2.1
P06344 Igkv12-49-201ENSMUST00000197714 278 ntBASIC1.96□□□□□ -2.1
P06344 Gm43739-201ENSMUST00000198294 307 ntBASIC1.96□□□□□ -2.1
P06344 Gm43680-201ENSMUST00000199466 340 ntBASIC1.96□□□□□ -2.1
P06344 Gm44083-201ENSMUST00000203114 337 ntBASIC1.96□□□□□ -2.1
P06344 Gm44844-201ENSMUST00000207242 336 ntBASIC1.96□□□□□ -2.1
P06344 Gm19118-201ENSMUST00000222554 98 ntBASIC1.96□□□□□ -2.1
P06344 AC159619.2-201ENSMUST00000222924 401 ntBASIC1.96□□□□□ -2.1
P06344 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.96□□□□□ -2.1
P06344 Gm23627-201ENSMUST00000082459 107 ntBASIC1.96□□□□□ -2.1
P06344 Gm22502-201ENSMUST00000082488 107 ntBASIC1.96□□□□□ -2.1
P06344 Gm22977-201ENSMUST00000082615 107 ntBASIC1.96□□□□□ -2.1
P06344 Gm24149-201ENSMUST00000082757 107 ntBASIC1.96□□□□□ -2.1
P06344 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
P06344 Gm25207-201ENSMUST00000093745 107 ntBASIC1.96□□□□□ -2.1
P06344 Gm45558-201ENSMUST00000209384 1895 ntBASIC1.96□□□□□ -2.1
P06344 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC1.96□□□□□ -2.1
P06344 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
P06344 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
P06344 Gm37566-201ENSMUST00000192363 4355 ntBASIC1.96□□□□□ -2.1
P06344 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
P06344 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.95□□□□□ -2.1
P06344 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
P06344 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
P06344 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.95□□□□□ -2.1
P06344 Gm7164-201ENSMUST00000117503 450 ntBASIC1.95□□□□□ -2.1
P06344 Gm13457-201ENSMUST00000117885 267 ntBASIC1.95□□□□□ -2.1
P06344 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.95□□□□□ -2.1
P06344 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.95□□□□□ -2.1
P06344 Gm25454-201ENSMUST00000157947 315 ntBASIC1.95□□□□□ -2.1
P06344 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.95□□□□□ -2.1
P06344 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
P06344 Gm28211-201ENSMUST00000190920 315 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms