Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Vti1aO89116 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.79□□□□□ -1.8
Vti1aO89116 Gm24867-201ENSMUST00000104161 107 ntBASIC3.79□□□□□ -1.8
Vti1aO89116 Gm22023-201ENSMUST00000104354 130 ntBASIC3.79□□□□□ -1.8
Vti1aO89116 Gm15183-201ENSMUST00000118933 348 ntBASIC3.79□□□□□ -1.8
Vti1aO89116 Gm25805-201ENSMUST00000122788 108 ntBASIC3.79□□□□□ -1.8
Vti1aO89116 Gm4479-201ENSMUST00000178807 171 ntBASIC3.79□□□□□ -1.8
Vti1aO89116 Gm22450-201ENSMUST00000179641 107 ntBASIC3.79□□□□□ -1.8
Vti1aO89116 Gm25473-201ENSMUST00000180191 107 ntBASIC3.79□□□□□ -1.8
Vti1aO89116 Gm28825-201ENSMUST00000186233 238 ntBASIC3.79□□□□□ -1.8
Vti1aO89116 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.79□□□□□ -1.8
Vti1aO89116 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Vti1aO89116 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Vti1aO89116 Gm22507-201ENSMUST00000082773 160 ntBASIC3.79□□□□□ -1.8
Vti1aO89116 Gm24856-201ENSMUST00000082809 107 ntBASIC3.79□□□□□ -1.8
Vti1aO89116 Gm26071-201ENSMUST00000083261 107 ntBASIC3.79□□□□□ -1.8
Vti1aO89116 Mir181b-2-201ENSMUST00000083644 89 ntBASIC3.79□□□□□ -1.8
Vti1aO89116 Gm24521-201ENSMUST00000083958 107 ntBASIC3.79□□□□□ -1.8
Vti1aO89116 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Vti1aO89116 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Vti1aO89116 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Vti1aO89116 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.79□□□□□ -1.8
Vti1aO89116 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.79□□□□□ -1.8
Vti1aO89116 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Vti1aO89116 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Vti1aO89116 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Vti1aO89116 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.78□□□□□ -1.8
Vti1aO89116 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Vti1aO89116 Gm14811-201ENSMUST00000117070 117 ntBASIC3.78□□□□□ -1.8
Vti1aO89116 Gm11356-201ENSMUST00000118974 192 ntBASIC3.78□□□□□ -1.8
Vti1aO89116 Gm5937-201ENSMUST00000119715 643 ntBASIC3.78□□□□□ -1.8
Vti1aO89116 Gm12443-201ENSMUST00000122308 323 ntBASIC3.78□□□□□ -1.8
Vti1aO89116 Gm22027-201ENSMUST00000122737 127 ntBASIC3.78□□□□□ -1.8
Vti1aO89116 Gm24392-201ENSMUST00000158136 103 ntBASIC3.78□□□□□ -1.8
Vti1aO89116 Gm25654-201ENSMUST00000158467 88 ntBASIC3.78□□□□□ -1.8
Vti1aO89116 Gm24739-201ENSMUST00000158855 292 ntBASIC3.78□□□□□ -1.8
Vti1aO89116 Gm24667-201ENSMUST00000158938 103 ntBASIC3.78□□□□□ -1.8
Vti1aO89116 Mir6370-201ENSMUST00000183510 120 ntBASIC3.78□□□□□ -1.8
Vti1aO89116 Gm29104-201ENSMUST00000186304 222 ntBASIC3.78□□□□□ -1.8
Vti1aO89116 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.78□□□□□ -1.8
Vti1aO89116 Gm44533-201ENSMUST00000207782 268 ntBASIC3.78□□□□□ -1.8
Vti1aO89116 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.78□□□□□ -1.8
Vti1aO89116 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
Vti1aO89116 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Vti1aO89116 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Vti1aO89116 Gm14973-201ENSMUST00000117248 255 ntBASIC3.77□□□□□ -1.81
Vti1aO89116 Gm15162-201ENSMUST00000119325 283 ntBASIC3.77□□□□□ -1.81
Vti1aO89116 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Vti1aO89116 Gm25720-201ENSMUST00000157503 105 ntBASIC3.77□□□□□ -1.81
Vti1aO89116 Gm25454-201ENSMUST00000157947 315 ntBASIC3.77□□□□□ -1.81
Vti1aO89116 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.77□□□□□ -1.81
Vti1aO89116 Gm25024-201ENSMUST00000179667 104 ntBASIC3.77□□□□□ -1.81
Vti1aO89116 Gm27421-201ENSMUST00000184729 167 ntBASIC3.77□□□□□ -1.81
Vti1aO89116 Mir6540-201ENSMUST00000184886 108 ntBASIC3.77□□□□□ -1.81
Vti1aO89116 Gm19123-201ENSMUST00000190716 651 ntBASIC3.77□□□□□ -1.81
Vti1aO89116 Gm44343-201ENSMUST00000196702 90 ntBASIC3.77□□□□□ -1.81
Vti1aO89116 Gm18341-201ENSMUST00000197538 622 ntBASIC3.77□□□□□ -1.81
Vti1aO89116 Gm44524-201ENSMUST00000203899 271 ntBASIC3.77□□□□□ -1.81
Vti1aO89116 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.77□□□□□ -1.81
Vti1aO89116 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.77□□□□□ -1.81
Vti1aO89116 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Vti1aO89116 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Vti1aO89116 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
Vti1aO89116 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
Vti1aO89116 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.76□□□□□ -1.81
Vti1aO89116 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Vti1aO89116 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Vti1aO89116 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.76□□□□□ -1.81
Vti1aO89116 Mir1b-201ENSMUST00000117012 122 ntBASIC3.76□□□□□ -1.81
Vti1aO89116 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.76□□□□□ -1.81
Vti1aO89116 Gm23982-201ENSMUST00000157141 106 ntBASIC3.76□□□□□ -1.81
Vti1aO89116 Gm22316-201ENSMUST00000158012 216 ntBASIC3.76□□□□□ -1.81
Vti1aO89116 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Vti1aO89116 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.76□□□□□ -1.81
Vti1aO89116 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.76□□□□□ -1.81
Vti1aO89116 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Vti1aO89116 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
Vti1aO89116 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Vti1aO89116 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.75□□□□□ -1.81
Vti1aO89116 Gm24116-201ENSMUST00000103975 107 ntBASIC3.75□□□□□ -1.81
Vti1aO89116 Gm5762-201ENSMUST00000119204 258 ntBASIC3.75□□□□□ -1.81
Vti1aO89116 Gm14775-201ENSMUST00000122089 310 ntBASIC3.75□□□□□ -1.81
Vti1aO89116 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.75□□□□□ -1.81
Vti1aO89116 Gm28020-201ENSMUST00000157739 67 ntBASIC3.75□□□□□ -1.81
Vti1aO89116 Gm23559-201ENSMUST00000157824 103 ntBASIC3.75□□□□□ -1.81
Vti1aO89116 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.75□□□□□ -1.81
Vti1aO89116 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Vti1aO89116 Gm9712-201ENSMUST00000210842 311 ntBASIC3.75□□□□□ -1.81
Vti1aO89116 Gm6842-201ENSMUST00000211361 390 ntBASIC3.75□□□□□ -1.81
Vti1aO89116 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.75□□□□□ -1.81
Vti1aO89116 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.75□□□□□ -1.81
Vti1aO89116 AC173482.5-201ENSMUST00000224181 327 ntBASIC3.75□□□□□ -1.81
Vti1aO89116 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.75□□□□□ -1.81
Vti1aO89116 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.75□□□□□ -1.81
Vti1aO89116 Gm10212-201ENSMUST00000087884 324 ntBASIC3.75□□□□□ -1.81
Vti1aO89116 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Vti1aO89116 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Vti1aO89116 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.74□□□□□ -1.81
Vti1aO89116 Gm5396-201ENSMUST00000121222 532 ntBASIC3.74□□□□□ -1.81
Vti1aO89116 Gm22026-201ENSMUST00000122735 281 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 368.6 ms