Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC3.1□□□□□ -1.91
Best1O88870 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Best1O88870 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Best1O88870 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Best1O88870 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Best1O88870 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Best1O88870 CT030170.3-201ENSMUST00000221205 1815 ntBASIC3.09□□□□□ -1.91
Best1O88870 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Best1O88870 Gm13432-201ENSMUST00000118861 241 ntBASIC3.09□□□□□ -1.91
Best1O88870 Gm25625-201ENSMUST00000157221 96 ntBASIC3.09□□□□□ -1.91
Best1O88870 Gm26105-201ENSMUST00000157253 190 ntBASIC3.09□□□□□ -1.91
Best1O88870 Gm24138-201ENSMUST00000157572 114 ntBASIC3.09□□□□□ -1.91
Best1O88870 Gm24348-201ENSMUST00000158710 130 ntBASIC3.09□□□□□ -1.91
Best1O88870 Gm26297-201ENSMUST00000179464 132 ntBASIC3.09□□□□□ -1.91
Best1O88870 Gm25457-201ENSMUST00000179509 107 ntBASIC3.09□□□□□ -1.91
Best1O88870 Mir8096-201ENSMUST00000184526 127 ntBASIC3.09□□□□□ -1.91
Best1O88870 Gm29658-201ENSMUST00000185404 230 ntBASIC3.09□□□□□ -1.91
Best1O88870 Trbv18-201ENSMUST00000194256 294 ntBASIC3.09□□□□□ -1.91
Best1O88870 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.09□□□□□ -1.91
Best1O88870 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.09□□□□□ -1.91
Best1O88870 Gm19118-201ENSMUST00000222554 98 ntBASIC3.09□□□□□ -1.91
Best1O88870 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Best1O88870 Gm24152-201ENSMUST00000082764 163 ntBASIC3.09□□□□□ -1.91
Best1O88870 Gm23851-201ENSMUST00000083831 103 ntBASIC3.09□□□□□ -1.91
Best1O88870 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Best1O88870 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.09□□□□□ -1.92
Best1O88870 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.08□□□□□ -1.92
Best1O88870 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Best1O88870 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.08□□□□□ -1.92
Best1O88870 Gm23175-201ENSMUST00000104371 132 ntBASIC3.08□□□□□ -1.92
Best1O88870 Mir872-201ENSMUST00000104728 81 ntBASIC3.08□□□□□ -1.92
Best1O88870 Gm12837-201ENSMUST00000120131 373 ntBASIC3.08□□□□□ -1.92
Best1O88870 Gm7592-201ENSMUST00000160674 627 ntBASIC3.08□□□□□ -1.92
Best1O88870 Gm7582-201ENSMUST00000160831 603 ntBASIC3.08□□□□□ -1.92
Best1O88870 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC3.08□□□□□ -1.92
Best1O88870 Gm24304-201ENSMUST00000177635 107 ntBASIC3.08□□□□□ -1.92
Best1O88870 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Best1O88870 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Best1O88870 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Best1O88870 Gm17522-201ENSMUST00000178144 498 ntBASIC3.08□□□□□ -1.92
Best1O88870 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Best1O88870 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Best1O88870 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Best1O88870 Gm27783-201ENSMUST00000183534 105 ntBASIC3.08□□□□□ -1.92
Best1O88870 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.08□□□□□ -1.92
Best1O88870 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC3.08□□□□□ -1.92
Best1O88870 Gm29602-201ENSMUST00000186887 442 ntBASIC3.08□□□□□ -1.92
Best1O88870 Gm43406-201ENSMUST00000200356 334 ntBASIC3.08□□□□□ -1.92
Best1O88870 Gm45778-201ENSMUST00000211959 153 ntBASIC3.08□□□□□ -1.92
Best1O88870 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC3.08□□□□□ -1.92
Best1O88870 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.08□□□□□ -1.92
Best1O88870 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.08□□□□□ -1.92
Best1O88870 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Best1O88870 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Best1O88870 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Best1O88870 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Best1O88870 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.07□□□□□ -1.92
Best1O88870 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Best1O88870 Gm22023-201ENSMUST00000104354 130 ntBASIC3.07□□□□□ -1.92
Best1O88870 Gm12647-201ENSMUST00000118977 265 ntBASIC3.07□□□□□ -1.92
Best1O88870 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC3.07□□□□□ -1.92
Best1O88870 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.07□□□□□ -1.92
Best1O88870 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.07□□□□□ -1.92
Best1O88870 Gm25020-201ENSMUST00000178071 107 ntBASIC3.07□□□□□ -1.92
Best1O88870 Gm28002-201ENSMUST00000184832 100 ntBASIC3.07□□□□□ -1.92
Best1O88870 Gm28257-201ENSMUST00000185244 463 ntBASIC3.07□□□□□ -1.92
Best1O88870 Gm20257-202ENSMUST00000188643 130 ntBASIC3.07□□□□□ -1.92
Best1O88870 AC161426.1-201ENSMUST00000214137 286 ntBASIC3.07□□□□□ -1.92
Best1O88870 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC3.07□□□□□ -1.92
Best1O88870 AC114010.1-201ENSMUST00000222060 379 ntBASIC3.07□□□□□ -1.92
Best1O88870 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.07□□□□□ -1.92
Best1O88870 Gm23731-201ENSMUST00000083749 107 ntBASIC3.07□□□□□ -1.92
Best1O88870 Gm45393-201ENSMUST00000211634 2631 ntBASIC3.07□□□□□ -1.92
Best1O88870 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Best1O88870 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Best1O88870 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Best1O88870 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Best1O88870 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Best1O88870 Gm22678-201ENSMUST00000116974 101 ntBASIC3.06□□□□□ -1.92
Best1O88870 Gm26477-201ENSMUST00000122617 323 ntBASIC3.06□□□□□ -1.92
Best1O88870 Gm25543-201ENSMUST00000122678 312 ntBASIC3.06□□□□□ -1.92
Best1O88870 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.06□□□□□ -1.92
Best1O88870 Gm22187-201ENSMUST00000157819 129 ntBASIC3.06□□□□□ -1.92
Best1O88870 Gm25476-201ENSMUST00000175125 185 ntBASIC3.06□□□□□ -1.92
Best1O88870 Gm36891-201ENSMUST00000191995 655 ntBASIC3.06□□□□□ -1.92
Best1O88870 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.06□□□□□ -1.92
Best1O88870 Gm44794-201ENSMUST00000206550 411 ntBASIC3.06□□□□□ -1.92
Best1O88870 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Best1O88870 Gm10033-201ENSMUST00000072427 1813 ntBASIC3.06□□□□□ -1.92
Best1O88870 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Best1O88870 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.05□□□□□ -1.92
Best1O88870 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.05□□□□□ -1.92
Best1O88870 Gm22713-201ENSMUST00000116895 130 ntBASIC3.05□□□□□ -1.92
Best1O88870 Gm12646-201ENSMUST00000119144 238 ntBASIC3.05□□□□□ -1.92
Best1O88870 Gm15365-201ENSMUST00000122392 300 ntBASIC3.05□□□□□ -1.92
Best1O88870 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.05□□□□□ -1.92
Best1O88870 Gm23232-201ENSMUST00000157300 105 ntBASIC3.05□□□□□ -1.92
Best1O88870 Gm26061-201ENSMUST00000175584 108 ntBASIC3.05□□□□□ -1.92
Best1O88870 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.05□□□□□ -1.92
Best1O88870 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 142.3 ms