Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Gm24914-201ENSMUST00000157285 313 ntBASIC3.36□□□□□ -1.87
Vti1bO88384 Gm24745-201ENSMUST00000157840 85 ntBASIC3.36□□□□□ -1.87
Vti1bO88384 Gm25438-201ENSMUST00000158281 110 ntBASIC3.36□□□□□ -1.87
Vti1bO88384 Gm22840-201ENSMUST00000158444 136 ntBASIC3.36□□□□□ -1.87
Vti1bO88384 Gm22433-201ENSMUST00000158550 142 ntBASIC3.36□□□□□ -1.87
Vti1bO88384 Ear-ps8-201ENSMUST00000161935 354 ntBASIC3.36□□□□□ -1.87
Vti1bO88384 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.36□□□□□ -1.87
Vti1bO88384 Gm21893-201ENSMUST00000179119 397 ntBASIC3.36□□□□□ -1.87
Vti1bO88384 Gm22450-201ENSMUST00000179641 107 ntBASIC3.36□□□□□ -1.87
Vti1bO88384 Gm25473-201ENSMUST00000180191 107 ntBASIC3.36□□□□□ -1.87
Vti1bO88384 Mir6540-201ENSMUST00000184886 108 ntBASIC3.36□□□□□ -1.87
Vti1bO88384 Gm28453-203ENSMUST00000187041 189 ntBASIC3.36□□□□□ -1.87
Vti1bO88384 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC3.36□□□□□ -1.87
Vti1bO88384 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.36□□□□□ -1.87
Vti1bO88384 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.36□□□□□ -1.87
Vti1bO88384 Gm43193-201ENSMUST00000197732 441 ntBASIC3.36□□□□□ -1.87
Vti1bO88384 Gm44399-201ENSMUST00000205043 226 ntBASIC3.36□□□□□ -1.87
Vti1bO88384 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.36□□□□□ -1.87
Vti1bO88384 Gm24856-201ENSMUST00000082809 107 ntBASIC3.36□□□□□ -1.87
Vti1bO88384 Gm26071-201ENSMUST00000083261 107 ntBASIC3.36□□□□□ -1.87
Vti1bO88384 Mir181b-2-201ENSMUST00000083644 89 ntBASIC3.36□□□□□ -1.87
Vti1bO88384 Gm24521-201ENSMUST00000083958 107 ntBASIC3.36□□□□□ -1.87
Vti1bO88384 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Vti1bO88384 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Vti1bO88384 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Vti1bO88384 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.36□□□□□ -1.87
Vti1bO88384 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Vti1bO88384 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Vti1bO88384 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Vti1bO88384 Gm24079-201ENSMUST00000104352 132 ntBASIC3.35□□□□□ -1.87
Vti1bO88384 Gm23532-201ENSMUST00000104569 112 ntBASIC3.35□□□□□ -1.87
Vti1bO88384 Gm24640-201ENSMUST00000116949 126 ntBASIC3.35□□□□□ -1.87
Vti1bO88384 Gm22626-201ENSMUST00000116990 126 ntBASIC3.35□□□□□ -1.87
Vti1bO88384 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.35□□□□□ -1.87
Vti1bO88384 Gm24392-201ENSMUST00000158136 103 ntBASIC3.35□□□□□ -1.87
Vti1bO88384 Gm24667-201ENSMUST00000158938 103 ntBASIC3.35□□□□□ -1.87
Vti1bO88384 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.35□□□□□ -1.87
Vti1bO88384 Gm24761-201ENSMUST00000179589 127 ntBASIC3.35□□□□□ -1.87
Vti1bO88384 Gm25024-201ENSMUST00000179667 104 ntBASIC3.35□□□□□ -1.87
Vti1bO88384 Gm24488-201ENSMUST00000179934 127 ntBASIC3.35□□□□□ -1.87
Vti1bO88384 Gm25701-201ENSMUST00000179988 127 ntBASIC3.35□□□□□ -1.87
Vti1bO88384 Gm26431-201ENSMUST00000180199 127 ntBASIC3.35□□□□□ -1.87
Vti1bO88384 Mir6926-201ENSMUST00000184562 68 ntBASIC3.35□□□□□ -1.87
Vti1bO88384 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.35□□□□□ -1.87
Vti1bO88384 Gm37746-201ENSMUST00000193249 198 ntBASIC3.35□□□□□ -1.87
Vti1bO88384 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.35□□□□□ -1.87
Vti1bO88384 CT954323.1-201ENSMUST00000222774 229 ntBASIC3.35□□□□□ -1.87
Vti1bO88384 Gm25205-201ENSMUST00000082841 103 ntBASIC3.35□□□□□ -1.87
Vti1bO88384 Mir132-201ENSMUST00000083603 66 ntBASIC3.35□□□□□ -1.87
Vti1bO88384 Snord15a-201ENSMUST00000083888 148 ntBASIC3.35□□□□□ -1.87
Vti1bO88384 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.35□□□□□ -1.87
Vti1bO88384 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Vti1bO88384 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.34□□□□□ -1.87
Vti1bO88384 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.34□□□□□ -1.87
Vti1bO88384 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Vti1bO88384 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Vti1bO88384 Gm12797-201ENSMUST00000118645 273 ntBASIC3.34□□□□□ -1.87
Vti1bO88384 Gm11704-201ENSMUST00000120031 214 ntBASIC3.34□□□□□ -1.87
Vti1bO88384 Gm14922-201ENSMUST00000121131 163 ntBASIC3.34□□□□□ -1.87
Vti1bO88384 Gm23892-201ENSMUST00000158105 130 ntBASIC3.34□□□□□ -1.87
Vti1bO88384 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Vti1bO88384 Ear-ps4-201ENSMUST00000166834 450 ntBASIC3.34□□□□□ -1.87
Vti1bO88384 Gm20399-201ENSMUST00000174652 132 ntBASIC3.34□□□□□ -1.87
Vti1bO88384 Gm26928-201ENSMUST00000182674 572 ntBASIC3.34□□□□□ -1.87
Vti1bO88384 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.34□□□□□ -1.87
Vti1bO88384 Gm6030-201ENSMUST00000078768 402 ntBASIC3.34□□□□□ -1.87
Vti1bO88384 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Vti1bO88384 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Vti1bO88384 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Vti1bO88384 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Vti1bO88384 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.33□□□□□ -1.88
Vti1bO88384 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
Vti1bO88384 Gm23836-201ENSMUST00000104434 129 ntBASIC3.33□□□□□ -1.88
Vti1bO88384 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.33□□□□□ -1.88
Vti1bO88384 Gm23901-201ENSMUST00000157570 107 ntBASIC3.33□□□□□ -1.88
Vti1bO88384 Gm23084-201ENSMUST00000157850 114 ntBASIC3.33□□□□□ -1.88
Vti1bO88384 Gm23219-201ENSMUST00000158123 87 ntBASIC3.33□□□□□ -1.88
Vti1bO88384 Gm6060-201ENSMUST00000188671 251 ntBASIC3.33□□□□□ -1.88
Vti1bO88384 Gm19123-201ENSMUST00000190716 651 ntBASIC3.33□□□□□ -1.88
Vti1bO88384 Gm20144-201ENSMUST00000203031 165 ntBASIC3.33□□□□□ -1.88
Vti1bO88384 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Vti1bO88384 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Vti1bO88384 Gm25482-201ENSMUST00000083225 107 ntBASIC3.33□□□□□ -1.88
Vti1bO88384 Gm26265-201ENSMUST00000083277 135 ntBASIC3.33□□□□□ -1.88
Vti1bO88384 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Vti1bO88384 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Vti1bO88384 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Vti1bO88384 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Vti1bO88384 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Vti1bO88384 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Vti1bO88384 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.32□□□□□ -1.88
Vti1bO88384 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Vti1bO88384 Gm12513-201ENSMUST00000118617 352 ntBASIC3.32□□□□□ -1.88
Vti1bO88384 Gm12351-201ENSMUST00000118727 292 ntBASIC3.32□□□□□ -1.88
Vti1bO88384 Gm12417-201ENSMUST00000119153 403 ntBASIC3.32□□□□□ -1.88
Vti1bO88384 Gm15162-201ENSMUST00000119325 283 ntBASIC3.32□□□□□ -1.88
Vti1bO88384 Gm6574-201ENSMUST00000120037 362 ntBASIC3.32□□□□□ -1.88
Vti1bO88384 Gm16005-201ENSMUST00000120515 269 ntBASIC3.32□□□□□ -1.88
Vti1bO88384 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.32□□□□□ -1.88
Vti1bO88384 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 178 ms