Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Mir22-201ENSMUST00000083595 95 ntBASIC0.83□□□□□ -2.28
Hmgb3O54879 Gm25683-201ENSMUST00000083940 131 ntBASIC0.83□□□□□ -2.28
Hmgb3O54879 Gm45872-201ENSMUST00000209804 1584 ntBASIC0.83□□□□□ -2.28
Hmgb3O54879 AC163660.3-201ENSMUST00000224253 1563 ntBASIC0.83□□□□□ -2.28
Hmgb3O54879 Gm23010-201ENSMUST00000104151 126 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 Gm25421-201ENSMUST00000104218 164 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 Gm14624-201ENSMUST00000117746 192 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 Gm2003-201ENSMUST00000118537 636 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 Gm15090-201ENSMUST00000118787 1196 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 Gm14898-201ENSMUST00000120202 645 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 Gm14402-201ENSMUST00000122217 508 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 Gm15089-201ENSMUST00000122332 1196 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC0.82□□□□□ -2.28
Hmgb3O54879 Gm22038-201ENSMUST00000157277 242 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 Gm23208-201ENSMUST00000158666 127 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 Mir8119-201ENSMUST00000183371 129 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 Gm37162-201ENSMUST00000191708 551 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 Gm44336-201ENSMUST00000203696 468 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 Gm21089-201ENSMUST00000215843 325 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC0.82□□□□□ -2.28
Hmgb3O54879 Snora41-201ENSMUST00000082668 132 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 Gm22810-201ENSMUST00000082741 158 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 Snord96a-201ENSMUST00000082791 81 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 Gm26263-201ENSMUST00000083281 164 ntBASIC0.82□□□□□ -2.28
Hmgb3O54879 Mir467h-201ENSMUST00000116759 121 ntBASIC0.81□□□□□ -2.28
Hmgb3O54879 Gm23858-201ENSMUST00000158384 106 ntBASIC0.81□□□□□ -2.28
Hmgb3O54879 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC0.81□□□□□ -2.28
Hmgb3O54879 Gm22510-201ENSMUST00000179304 79 ntBASIC0.81□□□□□ -2.28
Hmgb3O54879 Gm26336-201ENSMUST00000179449 79 ntBASIC0.81□□□□□ -2.28
Hmgb3O54879 Gm26390-201ENSMUST00000179628 79 ntBASIC0.81□□□□□ -2.28
Hmgb3O54879 Gm28283-201ENSMUST00000185509 178 ntBASIC0.81□□□□□ -2.28
Hmgb3O54879 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.81□□□□□ -2.28
Hmgb3O54879 Gm20118-201ENSMUST00000187207 162 ntBASIC0.81□□□□□ -2.28
Hmgb3O54879 Gm38146-201ENSMUST00000194121 1293 ntBASIC0.81□□□□□ -2.28
Hmgb3O54879 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC0.81□□□□□ -2.28
Hmgb3O54879 AC101677.1-201ENSMUST00000218590 158 ntBASIC0.81□□□□□ -2.28
Hmgb3O54879 AC131085.1-201ENSMUST00000224746 656 ntBASIC0.81□□□□□ -2.28
Hmgb3O54879 Gm26446-201ENSMUST00000082455 103 ntBASIC0.81□□□□□ -2.28
Hmgb3O54879 Gm23462-201ENSMUST00000083264 104 ntBASIC0.81□□□□□ -2.28
Hmgb3O54879 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Hmgb3O54879 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Hmgb3O54879 Gm22073-201ENSMUST00000122668 189 ntBASIC0.8□□□□□ -2.28
Hmgb3O54879 Gm24896-201ENSMUST00000122741 135 ntBASIC0.8□□□□□ -2.28
Hmgb3O54879 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.8□□□□□ -2.28
Hmgb3O54879 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC0.8□□□□□ -2.28
Hmgb3O54879 Gm24464-201ENSMUST00000179697 107 ntBASIC0.8□□□□□ -2.28
Hmgb3O54879 Gm28412-201ENSMUST00000187243 177 ntBASIC0.8□□□□□ -2.28
Hmgb3O54879 Gm37599-201ENSMUST00000193067 489 ntBASIC0.8□□□□□ -2.28
Hmgb3O54879 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Hmgb3O54879 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.8□□□□□ -2.28
Hmgb3O54879 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC0.8□□□□□ -2.28
Hmgb3O54879 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC0.8□□□□□ -2.28
Hmgb3O54879 Gm22575-201ENSMUST00000082981 110 ntBASIC0.8□□□□□ -2.28
Hmgb3O54879 Gm37061-201ENSMUST00000195066 3243 ntBASIC0.8□□□□□ -2.28
Hmgb3O54879 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Hmgb3O54879 Gm14551-201ENSMUST00000120802 256 ntBASIC0.79□□□□□ -2.28
Hmgb3O54879 Gm24840-201ENSMUST00000122603 147 ntBASIC0.79□□□□□ -2.28
Hmgb3O54879 Gm24480-201ENSMUST00000157442 103 ntBASIC0.79□□□□□ -2.28
Hmgb3O54879 Gm24784-201ENSMUST00000157640 62 ntBASIC0.79□□□□□ -2.28
Hmgb3O54879 Gm23068-201ENSMUST00000158239 293 ntBASIC0.79□□□□□ -2.28
Hmgb3O54879 Gm23854-201ENSMUST00000158378 108 ntBASIC0.79□□□□□ -2.28
Hmgb3O54879 Gm22425-201ENSMUST00000158532 138 ntBASIC0.79□□□□□ -2.28
Hmgb3O54879 Gm24020-201ENSMUST00000180156 108 ntBASIC0.79□□□□□ -2.28
Hmgb3O54879 Gm29216-201ENSMUST00000187117 492 ntBASIC0.79□□□□□ -2.28
Hmgb3O54879 Gm37579-201ENSMUST00000194291 142 ntBASIC0.79□□□□□ -2.28
Hmgb3O54879 Gm37361-201ENSMUST00000194345 132 ntBASIC0.79□□□□□ -2.28
Hmgb3O54879 Gm34139-201ENSMUST00000196166 294 ntBASIC0.79□□□□□ -2.28
Hmgb3O54879 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC0.79□□□□□ -2.28
Hmgb3O54879 Gm44655-201ENSMUST00000207768 423 ntBASIC0.79□□□□□ -2.28
Hmgb3O54879 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC0.79□□□□□ -2.28
Hmgb3O54879 Gm2829-201ENSMUST00000213121 499 ntBASIC0.79□□□□□ -2.28
Hmgb3O54879 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.79□□□□□ -2.28
Hmgb3O54879 AC154552.7-201ENSMUST00000222824 156 ntBASIC0.79□□□□□ -2.28
Hmgb3O54879 Gm14823-201ENSMUST00000117698 238 ntBASIC0.78□□□□□ -2.28
Hmgb3O54879 Gm24598-201ENSMUST00000122510 74 ntBASIC0.78□□□□□ -2.28
Hmgb3O54879 Gm23083-201ENSMUST00000157851 116 ntBASIC0.78□□□□□ -2.28
Hmgb3O54879 Gm15914-201ENSMUST00000161922 309 ntBASIC0.78□□□□□ -2.28
Hmgb3O54879 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC0.78□□□□□ -2.28
Hmgb3O54879 Gm28344-201ENSMUST00000185704 279 ntBASIC0.78□□□□□ -2.28
Hmgb3O54879 Gm29037-201ENSMUST00000189092 313 ntBASIC0.78□□□□□ -2.28
Hmgb3O54879 Igkv15-102-201ENSMUST00000197885 287 ntBASIC0.78□□□□□ -2.28
Hmgb3O54879 Gm43004-201ENSMUST00000201872 703 ntBASIC0.78□□□□□ -2.28
Hmgb3O54879 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.78□□□□□ -2.28
Hmgb3O54879 AC154252.1-201ENSMUST00000226041 473 ntBASIC0.78□□□□□ -2.28
Hmgb3O54879 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
Hmgb3O54879 Mir544-201ENSMUST00000103813 78 ntBASIC0.77□□□□□ -2.29
Hmgb3O54879 Gm26080-201ENSMUST00000104069 131 ntBASIC0.77□□□□□ -2.29
Hmgb3O54879 Gm23744-201ENSMUST00000104231 149 ntBASIC0.77□□□□□ -2.29
Hmgb3O54879 n-R5s67-201ENSMUST00000104336 114 ntBASIC0.77□□□□□ -2.29
Hmgb3O54879 Gm15010-201ENSMUST00000117153 407 ntBASIC0.77□□□□□ -2.29
Hmgb3O54879 Gm14887-201ENSMUST00000119522 663 ntBASIC0.77□□□□□ -2.29
Hmgb3O54879 Gm15807-201ENSMUST00000119880 1128 ntBASIC0.77□□□□□ -2.29
Hmgb3O54879 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.77□□□□□ -2.29
Hmgb3O54879 Gm24892-201ENSMUST00000122747 104 ntBASIC0.77□□□□□ -2.29
Hmgb3O54879 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.77□□□□□ -2.29
Hmgb3O54879 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
Hmgb3O54879 Gm22885-201ENSMUST00000157410 107 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms