Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Gm13885-201ENSMUST00000117569 187 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Gm15443-201ENSMUST00000118947 820 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Gm12309-201ENSMUST00000119889 182 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Gm16129-201ENSMUST00000152628 486 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Gm23083-201ENSMUST00000157851 116 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Gm26271-201ENSMUST00000158349 104 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Gm22076-201ENSMUST00000158601 84 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Gm15914-201ENSMUST00000161922 309 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC1.24□□□□□ -2.21
Bhlhe40O35185 Mir3968-201ENSMUST00000175355 100 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Gm22584-201ENSMUST00000177935 92 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Gm29550-201ENSMUST00000185543 285 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Gm29950-201ENSMUST00000195273 237 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Gm42509-201ENSMUST00000197390 781 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Gm43004-201ENSMUST00000201872 703 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Gm45116-201ENSMUST00000207392 275 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Gm45232-201ENSMUST00000207811 162 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 AC091260.1-201ENSMUST00000216112 229 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Gm22508-201ENSMUST00000082772 110 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Gm26328-201ENSMUST00000082821 107 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Gm25794-201ENSMUST00000083286 107 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Gm25409-201ENSMUST00000083764 131 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Gm26175-201ENSMUST00000083794 131 ntBASIC1.24□□□□□ -2.21
Bhlhe40O35185 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.24□□□□□ -2.21
Bhlhe40O35185 Gm381-201ENSMUST00000117443 2037 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Mir223-201ENSMUST00000102112 110 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm22780-201ENSMUST00000104084 132 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm14835-201ENSMUST00000119039 315 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm12304-201ENSMUST00000120312 385 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm22236-201ENSMUST00000157093 106 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm22559-201ENSMUST00000157329 134 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Snord13-201ENSMUST00000157627 104 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm24997-201ENSMUST00000157910 105 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm23196-201ENSMUST00000158806 107 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm20543-201ENSMUST00000174200 726 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm23636-201ENSMUST00000175070 95 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm23619-201ENSMUST00000178411 94 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm22862-201ENSMUST00000178593 121 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm25474-201ENSMUST00000179052 94 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm22047-201ENSMUST00000179176 94 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm21978-201ENSMUST00000179696 377 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm9022-202ENSMUST00000183285 483 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm28404-201ENSMUST00000190242 453 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Trbv22-201ENSMUST00000191697 291 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.23□□□□□ -2.21
Bhlhe40O35185 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm24045-201ENSMUST00000083113 98 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm23100-201ENSMUST00000083455 141 ntBASIC1.23□□□□□ -2.21
Bhlhe40O35185 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Bhlhe40O35185 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Bhlhe40O35185 Gm25541-201ENSMUST00000116888 126 ntBASIC1.22□□□□□ -2.21
Bhlhe40O35185 Gm12636-201ENSMUST00000117395 624 ntBASIC1.22□□□□□ -2.21
Bhlhe40O35185 Gm11359-201ENSMUST00000120039 567 ntBASIC1.22□□□□□ -2.21
Bhlhe40O35185 Gm14551-201ENSMUST00000120802 256 ntBASIC1.22□□□□□ -2.21
Bhlhe40O35185 Gm25706-201ENSMUST00000157828 247 ntBASIC1.22□□□□□ -2.21
Bhlhe40O35185 Gm23760-201ENSMUST00000158350 116 ntBASIC1.22□□□□□ -2.21
Bhlhe40O35185 Gm26029-201ENSMUST00000158659 132 ntBASIC1.22□□□□□ -2.21
Bhlhe40O35185 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.22□□□□□ -2.21
Bhlhe40O35185 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.22□□□□□ -2.21
Bhlhe40O35185 Gm24154-201ENSMUST00000175261 130 ntBASIC1.22□□□□□ -2.21
Bhlhe40O35185 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.22□□□□□ -2.21
Bhlhe40O35185 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Bhlhe40O35185 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.22□□□□□ -2.21
Bhlhe40O35185 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.22□□□□□ -2.21
Bhlhe40O35185 AC101677.1-201ENSMUST00000218590 158 ntBASIC1.22□□□□□ -2.21
Bhlhe40O35185 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.22□□□□□ -2.21
Bhlhe40O35185 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.22□□□□□ -2.21
Bhlhe40O35185 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.22□□□□□ -2.21
Bhlhe40O35185 Gm22062-201ENSMUST00000082563 107 ntBASIC1.22□□□□□ -2.21
Bhlhe40O35185 Gm22620-201ENSMUST00000082700 133 ntBASIC1.22□□□□□ -2.21
Bhlhe40O35185 Gm23503-201ENSMUST00000083903 107 ntBASIC1.22□□□□□ -2.21
Bhlhe40O35185 Mir687-201ENSMUST00000102166 89 ntBASIC1.21□□□□□ -2.22
Bhlhe40O35185 Gm15659-201ENSMUST00000118881 341 ntBASIC1.21□□□□□ -2.22
Bhlhe40O35185 Gm14887-201ENSMUST00000119522 663 ntBASIC1.21□□□□□ -2.22
Bhlhe40O35185 Gm23429-201ENSMUST00000122486 149 ntBASIC1.21□□□□□ -2.22
Bhlhe40O35185 Gm23586-201ENSMUST00000157657 123 ntBASIC1.21□□□□□ -2.22
Bhlhe40O35185 Gm22338-201ENSMUST00000157715 129 ntBASIC1.21□□□□□ -2.22
Bhlhe40O35185 Gm24439-201ENSMUST00000157894 117 ntBASIC1.21□□□□□ -2.22
Bhlhe40O35185 Gm24573-201ENSMUST00000175499 112 ntBASIC1.21□□□□□ -2.22
Bhlhe40O35185 Gm23568-201ENSMUST00000177960 92 ntBASIC1.21□□□□□ -2.22
Bhlhe40O35185 Gm24829-201ENSMUST00000179245 92 ntBASIC1.21□□□□□ -2.22
Bhlhe40O35185 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Bhlhe40O35185 Mir6341-201ENSMUST00000183490 121 ntBASIC1.21□□□□□ -2.22
Bhlhe40O35185 Mir7059-201ENSMUST00000184825 59 ntBASIC1.21□□□□□ -2.22
Bhlhe40O35185 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.21□□□□□ -2.22
Bhlhe40O35185 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.21□□□□□ -2.22
Bhlhe40O35185 Gm43529-201ENSMUST00000199178 412 ntBASIC1.21□□□□□ -2.22
Bhlhe40O35185 Gm44128-201ENSMUST00000204909 219 ntBASIC1.21□□□□□ -2.22
Bhlhe40O35185 Gm44564-201ENSMUST00000207985 180 ntBASIC1.21□□□□□ -2.22
Bhlhe40O35185 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC1.21□□□□□ -2.22
Bhlhe40O35185 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.21□□□□□ -2.22
Bhlhe40O35185 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.21□□□□□ -2.22
Bhlhe40O35185 CT009550.5-201ENSMUST00000226286 382 ntBASIC1.21□□□□□ -2.22
Bhlhe40O35185 Gm25582-201ENSMUST00000083412 110 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms