Protein–RNA interactions for Protein: O35177

Nedd9, Enhancer of filamentation 1, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd9O35177 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Nedd9O35177 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Nedd9O35177 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Nedd9O35177 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Nedd9O35177 Gm8260-201ENSMUST00000119230 353 ntBASIC3.35□□□□□ -1.87
Nedd9O35177 Gm12686-201ENSMUST00000120546 397 ntBASIC3.35□□□□□ -1.87
Nedd9O35177 Gm24818-201ENSMUST00000175093 161 ntBASIC3.35□□□□□ -1.87
Nedd9O35177 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.35□□□□□ -1.87
Nedd9O35177 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC3.35□□□□□ -1.87
Nedd9O35177 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.35□□□□□ -1.87
Nedd9O35177 Gm22620-201ENSMUST00000082700 133 ntBASIC3.35□□□□□ -1.87
Nedd9O35177 Gm25856-201ENSMUST00000082786 75 ntBASIC3.35□□□□□ -1.87
Nedd9O35177 Snord14d-201ENSMUST00000083424 86 ntBASIC3.35□□□□□ -1.87
Nedd9O35177 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Nedd9O35177 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.35□□□□□ -1.87
Nedd9O35177 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Nedd9O35177 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.34□□□□□ -1.87
Nedd9O35177 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Nedd9O35177 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nedd9O35177 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nedd9O35177 Mir1198-201ENSMUST00000116995 121 ntBASIC3.34□□□□□ -1.87
Nedd9O35177 Gm14894-201ENSMUST00000117170 270 ntBASIC3.34□□□□□ -1.87
Nedd9O35177 Gm12782-201ENSMUST00000117519 727 ntBASIC3.34□□□□□ -1.87
Nedd9O35177 Gm13210-201ENSMUST00000121483 273 ntBASIC3.34□□□□□ -1.87
Nedd9O35177 Gm15065-201ENSMUST00000121699 273 ntBASIC3.34□□□□□ -1.87
Nedd9O35177 Gm24914-201ENSMUST00000157285 313 ntBASIC3.34□□□□□ -1.87
Nedd9O35177 Gm16289-201ENSMUST00000162079 183 ntBASIC3.34□□□□□ -1.87
Nedd9O35177 Gm23864-201ENSMUST00000177607 107 ntBASIC3.34□□□□□ -1.87
Nedd9O35177 Gm25939-201ENSMUST00000179876 191 ntBASIC3.34□□□□□ -1.87
Nedd9O35177 Gm37449-201ENSMUST00000193016 270 ntBASIC3.34□□□□□ -1.87
Nedd9O35177 Gm18658-201ENSMUST00000195558 270 ntBASIC3.34□□□□□ -1.87
Nedd9O35177 Mir3535-201ENSMUST00000197651 147 ntBASIC3.34□□□□□ -1.87
Nedd9O35177 Gm43239-201ENSMUST00000200131 201 ntBASIC3.34□□□□□ -1.87
Nedd9O35177 Gm44977-201ENSMUST00000205283 420 ntBASIC3.34□□□□□ -1.87
Nedd9O35177 Gm9370-201ENSMUST00000222787 609 ntBASIC3.34□□□□□ -1.87
Nedd9O35177 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.34□□□□□ -1.87
Nedd9O35177 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.34□□□□□ -1.87
Nedd9O35177 AC129017.1-201ENSMUST00000228363 270 ntBASIC3.34□□□□□ -1.87
Nedd9O35177 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Nedd9O35177 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
Nedd9O35177 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Nedd9O35177 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Nedd9O35177 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Nedd9O35177 Gm24119-201ENSMUST00000103979 246 ntBASIC3.33□□□□□ -1.88
Nedd9O35177 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.33□□□□□ -1.88
Nedd9O35177 Mir6336-201ENSMUST00000183581 130 ntBASIC3.33□□□□□ -1.88
Nedd9O35177 Gm23370-202ENSMUST00000197008 129 ntBASIC3.33□□□□□ -1.88
Nedd9O35177 Gm43899-201ENSMUST00000203675 246 ntBASIC3.33□□□□□ -1.88
Nedd9O35177 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC3.33□□□□□ -1.88
Nedd9O35177 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC3.33□□□□□ -1.88
Nedd9O35177 CT030166.2-201ENSMUST00000222021 368 ntBASIC3.33□□□□□ -1.88
Nedd9O35177 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.33□□□□□ -1.88
Nedd9O35177 Gm23615-201ENSMUST00000082602 65 ntBASIC3.33□□□□□ -1.88
Nedd9O35177 Gm25896-201ENSMUST00000083713 136 ntBASIC3.33□□□□□ -1.88
Nedd9O35177 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.33□□□□□ -1.88
Nedd9O35177 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Nedd9O35177 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 Gm25875-201ENSMUST00000104323 107 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 Gm24640-201ENSMUST00000116949 126 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 Gm22626-201ENSMUST00000116990 126 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 Gm9009-201ENSMUST00000117321 326 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 Gm13355-201ENSMUST00000117996 317 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 Gm13581-201ENSMUST00000120675 278 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 Gm12617-201ENSMUST00000121268 381 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 Gm23886-201ENSMUST00000122684 313 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 Gm22447-201ENSMUST00000158155 92 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.32□□□□□ -1.88
Nedd9O35177 Gm24761-201ENSMUST00000179589 127 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 Gm24488-201ENSMUST00000179934 127 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 Gm25701-201ENSMUST00000179988 127 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 Gm26431-201ENSMUST00000180199 127 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.32□□□□□ -1.88
Nedd9O35177 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Nedd9O35177 Gm45859-201ENSMUST00000212794 214 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 Gm26225-201ENSMUST00000082508 135 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 Mir208a-201ENSMUST00000083498 83 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Nedd9O35177 AC164297.1-201ENSMUST00000224484 1561 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Nedd9O35177 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.32□□□□□ -1.88
Nedd9O35177 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Nedd9O35177 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.31□□□□□ -1.88
Nedd9O35177 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.31□□□□□ -1.88
Nedd9O35177 Gm10033-201ENSMUST00000072427 1813 ntBASIC3.31□□□□□ -1.88
Nedd9O35177 Gm22939-201ENSMUST00000103958 131 ntBASIC3.31□□□□□ -1.88
Nedd9O35177 Gm25407-201ENSMUST00000104102 134 ntBASIC3.31□□□□□ -1.88
Nedd9O35177 Mir881-201ENSMUST00000104844 78 ntBASIC3.31□□□□□ -1.88
Nedd9O35177 Gm13714-201ENSMUST00000117313 221 ntBASIC3.31□□□□□ -1.88
Nedd9O35177 Gm12771-201ENSMUST00000120246 135 ntBASIC3.31□□□□□ -1.88
Nedd9O35177 Gm23671-201ENSMUST00000157472 103 ntBASIC3.31□□□□□ -1.88
Nedd9O35177 Gm18433-202ENSMUST00000195682 196 ntBASIC3.31□□□□□ -1.88
Nedd9O35177 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.31□□□□□ -1.88
Nedd9O35177 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.31□□□□□ -1.88
Nedd9O35177 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Nedd9O35177 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.31□□□□□ -1.88
Nedd9O35177 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Nedd9O35177 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Nedd9O35177 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms