Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.02□□□□□ -2.41
Ccdc180J3QNE4 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.02□□□□□ -2.41
Ccdc180J3QNE4 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.02□□□□□ -2.41
Ccdc180J3QNE4 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.02□□□□□ -2.41
Ccdc180J3QNE4 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC0.02□□□□□ -2.41
Ccdc180J3QNE4 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.02□□□□□ -2.41
Ccdc180J3QNE4 Gm38208-201ENSMUST00000192476 114 ntBASIC0.02□□□□□ -2.41
Ccdc180J3QNE4 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.02□□□□□ -2.41
Ccdc180J3QNE4 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.02□□□□□ -2.41
Ccdc180J3QNE4 Gm45439-201ENSMUST00000211723 359 ntBASIC0.02□□□□□ -2.41
Ccdc180J3QNE4 Gm18113-201ENSMUST00000220630 303 ntBASIC0.02□□□□□ -2.41
Ccdc180J3QNE4 Gm14362-201ENSMUST00000121679 273 ntBASIC0.01□□□□□ -2.41
Ccdc180J3QNE4 Gm15254-201ENSMUST00000149567 273 ntBASIC0.01□□□□□ -2.41
Ccdc180J3QNE4 Gm24559-201ENSMUST00000157519 121 ntBASIC0.01□□□□□ -2.41
Ccdc180J3QNE4 Gm43171-201ENSMUST00000199882 291 ntBASIC0.01□□□□□ -2.41
Ccdc180J3QNE4 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC0.01□□□□□ -2.41
Ccdc180J3QNE4 AC133176.1-201ENSMUST00000226668 219 ntBASIC0.01□□□□□ -2.41
Ccdc180J3QNE4 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
Ccdc180J3QNE4 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Ccdc180J3QNE4 Mir29c-201ENSMUST00000083614 88 ntBASIC0.01□□□□□ -2.41
Ccdc180J3QNE4 Mir544-201ENSMUST00000103813 78 ntBASIC0□□□□□ -2.41
Ccdc180J3QNE4 Gm24588-201ENSMUST00000116696 83 ntBASIC0□□□□□ -2.41
Ccdc180J3QNE4 Gm14903-201ENSMUST00000122435 537 ntBASIC0□□□□□ -2.41
Ccdc180J3QNE4 Gm25332-201ENSMUST00000158038 105 ntBASIC0□□□□□ -2.41
Ccdc180J3QNE4 Gm22675-201ENSMUST00000158430 104 ntBASIC0□□□□□ -2.41
Ccdc180J3QNE4 Gm44657-201ENSMUST00000208568 450 ntBASIC0□□□□□ -2.41
Ccdc180J3QNE4 Mir429-201ENSMUST00000083493 83 ntBASIC0□□□□□ -2.41
Ccdc180J3QNE4 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC-0.01□□□□□ -2.41
Ccdc180J3QNE4 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
Ccdc180J3QNE4 Gm12392-201ENSMUST00000118014 938 ntBASIC-0.01□□□□□ -2.41
Ccdc180J3QNE4 Gm26101-201ENSMUST00000157246 105 ntBASIC-0.01□□□□□ -2.41
Ccdc180J3QNE4 Gm26102-201ENSMUST00000157251 284 ntBASIC-0.01□□□□□ -2.41
Ccdc180J3QNE4 Gm22768-201ENSMUST00000158366 153 ntBASIC-0.01□□□□□ -2.41
Ccdc180J3QNE4 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-0.01□□□□□ -2.41
Ccdc180J3QNE4 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC-0.01□□□□□ -2.41
Ccdc180J3QNE4 Gm27878-201ENSMUST00000184000 106 ntBASIC-0.01□□□□□ -2.41
Ccdc180J3QNE4 Gm37934-201ENSMUST00000192902 402 ntBASIC-0.01□□□□□ -2.41
Ccdc180J3QNE4 Gm43035-201ENSMUST00000197626 517 ntBASIC-0.01□□□□□ -2.41
Ccdc180J3QNE4 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC-0.01□□□□□ -2.41
Ccdc180J3QNE4 CT485612.2-201ENSMUST00000223014 151 ntBASIC-0.01□□□□□ -2.41
Ccdc180J3QNE4 AC134917.1-201ENSMUST00000220517 1449 ntBASIC-0.01□□□□□ -2.41
Ccdc180J3QNE4 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC-0.02□□□□□ -2.41
Ccdc180J3QNE4 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.02□□□□□ -2.41
Ccdc180J3QNE4 Gm24925-201ENSMUST00000178157 107 ntBASIC-0.02□□□□□ -2.41
Ccdc180J3QNE4 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC-0.02□□□□□ -2.41
Ccdc180J3QNE4 Gm43531-201ENSMUST00000200676 1114 ntBASIC-0.02□□□□□ -2.41
Ccdc180J3QNE4 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC-0.02□□□□□ -2.41
Ccdc180J3QNE4 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
Ccdc180J3QNE4 AC159476.2-201ENSMUST00000216221 418 ntBASIC-0.02□□□□□ -2.41
Ccdc180J3QNE4 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC-0.02□□□□□ -2.41
Ccdc180J3QNE4 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC-0.02□□□□□ -2.41
Ccdc180J3QNE4 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
Ccdc180J3QNE4 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC-0.02□□□□□ -2.41
Ccdc180J3QNE4 Gm25378-201ENSMUST00000104333 129 ntBASIC-0.02□□□□□ -2.41
Ccdc180J3QNE4 Gm23897-201ENSMUST00000158110 158 ntBASIC-0.02□□□□□ -2.41
Ccdc180J3QNE4 Gm44024-201ENSMUST00000203008 476 ntBASIC-0.02□□□□□ -2.41
Ccdc180J3QNE4 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
Ccdc180J3QNE4 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC-0.03□□□□□ -2.41
Ccdc180J3QNE4 Gm15213-201ENSMUST00000122098 216 ntBASIC-0.03□□□□□ -2.41
Ccdc180J3QNE4 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC-0.03□□□□□ -2.41
Ccdc180J3QNE4 Gm22829-201ENSMUST00000083771 106 ntBASIC-0.03□□□□□ -2.41
Ccdc180J3QNE4 Olfr575-201ENSMUST00000084812 957 ntBASIC-0.03□□□□□ -2.41
Ccdc180J3QNE4 Gm14774-201ENSMUST00000117857 536 ntBASIC-0.04□□□□□ -2.42
Ccdc180J3QNE4 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC-0.04□□□□□ -2.42
Ccdc180J3QNE4 Gm20477-201ENSMUST00000174028 280 ntBASIC-0.04□□□□□ -2.42
Ccdc180J3QNE4 Gm25026-201ENSMUST00000175017 188 ntBASIC-0.04□□□□□ -2.42
Ccdc180J3QNE4 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC-0.04□□□□□ -2.42
Ccdc180J3QNE4 Gm44607-201ENSMUST00000205611 1090 ntBASIC-0.04□□□□□ -2.42
Ccdc180J3QNE4 AC160863.1-201ENSMUST00000218412 317 ntBASIC-0.04□□□□□ -2.42
Ccdc180J3QNE4 AC154851.2-201ENSMUST00000222172 644 ntBASIC-0.04□□□□□ -2.42
Ccdc180J3QNE4 AC154262.1-201ENSMUST00000225976 286 ntBASIC-0.04□□□□□ -2.42
Ccdc180J3QNE4 Gm26326-201ENSMUST00000083070 129 ntBASIC-0.04□□□□□ -2.42
Ccdc180J3QNE4 Gm6587-201ENSMUST00000120219 613 ntBASIC-0.05□□□□□ -2.42
Ccdc180J3QNE4 Gm23277-201ENSMUST00000157914 136 ntBASIC-0.05□□□□□ -2.42
Ccdc180J3QNE4 Gm38231-201ENSMUST00000192030 347 ntBASIC-0.05□□□□□ -2.42
Ccdc180J3QNE4 Gm45387-201ENSMUST00000209792 632 ntBASIC-0.05□□□□□ -2.42
Ccdc180J3QNE4 Gm10038-201ENSMUST00000077233 441 ntBASIC-0.05□□□□□ -2.42
Ccdc180J3QNE4 Mir382-201ENSMUST00000083494 76 ntBASIC-0.05□□□□□ -2.42
Ccdc180J3QNE4 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
Ccdc180J3QNE4 Gm11606-201ENSMUST00000120706 617 ntBASIC-0.05□□□□□ -2.42
Ccdc180J3QNE4 AC158597.1-201ENSMUST00000216234 150 ntBASIC-0.05□□□□□ -2.42
Ccdc180J3QNE4 Mir33-201ENSMUST00000083531 69 ntBASIC-0.05□□□□□ -2.42
Ccdc180J3QNE4 Gm14554-201ENSMUST00000119548 661 ntBASIC-0.06□□□□□ -2.42
Ccdc180J3QNE4 Gm24963-201ENSMUST00000157916 144 ntBASIC-0.06□□□□□ -2.42
Ccdc180J3QNE4 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.06□□□□□ -2.42
Ccdc180J3QNE4 Gm21171-201ENSMUST00000180048 673 ntBASIC-0.06□□□□□ -2.42
Ccdc180J3QNE4 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC-0.06□□□□□ -2.42
Ccdc180J3QNE4 Gm45912-201ENSMUST00000210646 543 ntBASIC-0.06□□□□□ -2.42
Ccdc180J3QNE4 Gm22299-201ENSMUST00000082663 136 ntBASIC-0.06□□□□□ -2.42
Ccdc180J3QNE4 Gm22997-201ENSMUST00000082845 107 ntBASIC-0.06□□□□□ -2.42
Ccdc180J3QNE4 Gm24549-201ENSMUST00000158647 139 ntBASIC-0.07□□□□□ -2.42
Ccdc180J3QNE4 Gm23617-201ENSMUST00000175410 95 ntBASIC-0.07□□□□□ -2.42
Ccdc180J3QNE4 Mir3108-201ENSMUST00000175500 79 ntBASIC-0.07□□□□□ -2.42
Ccdc180J3QNE4 Gm24919-201ENSMUST00000083020 106 ntBASIC-0.07□□□□□ -2.42
Ccdc180J3QNE4 Gm14013-201ENSMUST00000119006 270 ntBASIC-0.08□□□□□ -2.42
Ccdc180J3QNE4 Gm11965-201ENSMUST00000122017 277 ntBASIC-0.08□□□□□ -2.42
Ccdc180J3QNE4 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.08□□□□□ -2.42
Ccdc180J3QNE4 Gm26256-201ENSMUST00000122499 186 ntBASIC-0.08□□□□□ -2.42
Ccdc180J3QNE4 Gm25805-201ENSMUST00000122788 108 ntBASIC-0.08□□□□□ -2.42
Ccdc180J3QNE4 Gm24419-201ENSMUST00000157875 332 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms