Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm18242-201ENSMUST00000218455 542 ntBASIC1.25□□□□□ -2.21
Chd3B1AR17 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Chd3B1AR17 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.25□□□□□ -2.21
Chd3B1AR17 Gm16412-201ENSMUST00000121602 273 ntBASIC1.25□□□□□ -2.21
Chd3B1AR17 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC1.25□□□□□ -2.21
Chd3B1AR17 Gm22559-201ENSMUST00000157329 134 ntBASIC1.25□□□□□ -2.21
Chd3B1AR17 Gm10177-202ENSMUST00000161698 207 ntBASIC1.25□□□□□ -2.21
Chd3B1AR17 Gm2966-201ENSMUST00000166052 481 ntBASIC1.25□□□□□ -2.21
Chd3B1AR17 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.25□□□□□ -2.21
Chd3B1AR17 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Chd3B1AR17 Gm42774-201ENSMUST00000198854 283 ntBASIC1.25□□□□□ -2.21
Chd3B1AR17 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC1.25□□□□□ -2.21
Chd3B1AR17 Mir465-201ENSMUST00000093563 74 ntBASIC1.25□□□□□ -2.21
Chd3B1AR17 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Chd3B1AR17 Gm12351-201ENSMUST00000118727 292 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 Gm23586-201ENSMUST00000157657 123 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 Gm3025-201ENSMUST00000163454 489 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 Gm44392-201ENSMUST00000196758 115 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 Gm17991-201ENSMUST00000208139 297 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC1.24□□□□□ -2.21
Chd3B1AR17 Gm25131-201ENSMUST00000082653 151 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 Mir29c-201ENSMUST00000083614 88 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.24□□□□□ -2.21
Chd3B1AR17 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 Gm12393-201ENSMUST00000117084 848 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 Gm25283-201ENSMUST00000157272 77 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 Gm26348-201ENSMUST00000157528 240 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 Gm23032-201ENSMUST00000157995 107 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 Gm24348-201ENSMUST00000158710 130 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.24□□□□□ -2.21
Chd3B1AR17 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC1.24□□□□□ -2.21
Chd3B1AR17 Gm45636-201ENSMUST00000210497 1064 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.24□□□□□ -2.21
Chd3B1AR17 AC154506.3-201ENSMUST00000225417 213 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 AC113031.5-201ENSMUST00000227116 606 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 Gm25409-201ENSMUST00000083764 131 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 Gm23741-201ENSMUST00000097237 171 ntBASIC1.24□□□□□ -2.21
Chd3B1AR17 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC1.23□□□□□ -2.21
Chd3B1AR17 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Chd3B1AR17 Gm11813-201ENSMUST00000118586 291 ntBASIC1.23□□□□□ -2.21
Chd3B1AR17 Gm6568-201ENSMUST00000122274 697 ntBASIC1.23□□□□□ -2.21
Chd3B1AR17 Gm23956-201ENSMUST00000157211 119 ntBASIC1.23□□□□□ -2.21
Chd3B1AR17 Mir3086-201ENSMUST00000175072 87 ntBASIC1.23□□□□□ -2.21
Chd3B1AR17 Snord87-201ENSMUST00000175437 87 ntBASIC1.23□□□□□ -2.21
Chd3B1AR17 Gm25020-201ENSMUST00000178071 107 ntBASIC1.23□□□□□ -2.21
Chd3B1AR17 Gm25730-201ENSMUST00000178753 165 ntBASIC1.23□□□□□ -2.21
Chd3B1AR17 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.23□□□□□ -2.21
Chd3B1AR17 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC1.23□□□□□ -2.21
Chd3B1AR17 AC113305.1-201ENSMUST00000214664 724 ntBASIC1.23□□□□□ -2.21
Chd3B1AR17 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.23□□□□□ -2.21
Chd3B1AR17 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.23□□□□□ -2.21
Chd3B1AR17 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.23□□□□□ -2.21
Chd3B1AR17 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.23□□□□□ -2.21
Chd3B1AR17 Gm22265-201ENSMUST00000082947 116 ntBASIC1.23□□□□□ -2.21
Chd3B1AR17 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Chd3B1AR17 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Chd3B1AR17 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Chd3B1AR17 Gm11065-201ENSMUST00000111462 228 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 Gm2003-201ENSMUST00000118537 636 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 Gm11784-201ENSMUST00000118568 474 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 Gm25715-201ENSMUST00000158627 125 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 Gm22527-201ENSMUST00000158816 106 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 Gm25873-201ENSMUST00000180317 107 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 Gm28437-201ENSMUST00000190277 783 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 Gm38231-201ENSMUST00000192030 347 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 AC131085.1-201ENSMUST00000224746 656 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Chd3B1AR17 Gm22443-201ENSMUST00000082890 107 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 Gm24582-201ENSMUST00000103967 103 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 Gm23202-201ENSMUST00000104376 129 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 Gm25294-201ENSMUST00000122791 104 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 Gm23466-201ENSMUST00000157133 106 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 Gm25491-201ENSMUST00000158733 308 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Chd3B1AR17 Gm29231-201ENSMUST00000179850 319 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Chd3B1AR17 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Chd3B1AR17 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC1.22□□□□□ -2.21
Chd3B1AR17 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Chd3B1AR17 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Chd3B1AR17 Gm22061-201ENSMUST00000082557 107 ntBASIC1.22□□□□□ -2.21
Chd3B1AR17 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.21□□□□□ -2.22
Chd3B1AR17 Gm25625-201ENSMUST00000157221 96 ntBASIC1.21□□□□□ -2.22
Chd3B1AR17 Snord11-201ENSMUST00000158468 84 ntBASIC1.21□□□□□ -2.22
Chd3B1AR17 Gm24551-201ENSMUST00000158645 92 ntBASIC1.21□□□□□ -2.22
Chd3B1AR17 Gm17377-201ENSMUST00000165184 207 ntBASIC1.21□□□□□ -2.22
Chd3B1AR17 Gm25243-201ENSMUST00000174912 207 ntBASIC1.21□□□□□ -2.22
Chd3B1AR17 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC1.21□□□□□ -2.22
Chd3B1AR17 Gm27980-201ENSMUST00000184094 169 ntBASIC1.21□□□□□ -2.22
Chd3B1AR17 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.21□□□□□ -2.22
Chd3B1AR17 Gm38044-201ENSMUST00000192964 487 ntBASIC1.21□□□□□ -2.22
Chd3B1AR17 AL669916.3-201ENSMUST00000213855 94 ntBASIC1.21□□□□□ -2.22
Chd3B1AR17 AL669916.6-201ENSMUST00000214610 94 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms