Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Mir6996-201ENSMUST00000183922 61 ntBASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Gm28159-201ENSMUST00000190296 696 ntBASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 AC173345.2-201ENSMUST00000222795 153 ntBASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 AC183092.1-201ENSMUST00000224301 153 ntBASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Gm23239-201ENSMUST00000083006 181 ntBASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Gm24453-201ENSMUST00000083346 76 ntBASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Ccdc9bA3KGF9 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 Gm23168-201ENSMUST00000157156 143 ntBASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 Gm25977-201ENSMUST00000158697 85 ntBASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 Gm17966-201ENSMUST00000193453 594 ntBASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 Gm26265-202ENSMUST00000196326 133 ntBASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 Gm44294-201ENSMUST00000205090 728 ntBASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 AL627387.1-201ENSMUST00000226063 250 ntBASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 Mir34b-201ENSMUST00000083558 84 ntBASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 Gm7452-202ENSMUST00000202891 3039 ntBASIC3.6□□□□□ -1.83
Ccdc9bA3KGF9 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 Gm24096-201ENSMUST00000103905 110 ntBASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 Gm23559-201ENSMUST00000157824 103 ntBASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 Gm24846-201ENSMUST00000158033 108 ntBASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 Gm22384-201ENSMUST00000158187 104 ntBASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 Gm22527-201ENSMUST00000158816 106 ntBASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 Gm22192-201ENSMUST00000175128 85 ntBASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 Gm33866-201ENSMUST00000196911 289 ntBASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 Gm42739-201ENSMUST00000200687 226 ntBASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 Gm44470-201ENSMUST00000203913 142 ntBASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 Gm44703-201ENSMUST00000205724 248 ntBASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 AC164561.1-201ENSMUST00000220414 115 ntBASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 AC168880.2-201ENSMUST00000224488 201 ntBASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 Gm25632-201ENSMUST00000083112 85 ntBASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 Gm24410-201ENSMUST00000083433 107 ntBASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ccdc9bA3KGF9 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.59□□□□□ -1.84
Ccdc9bA3KGF9 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Ccdc9bA3KGF9 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Snord14c-201ENSMUST00000101927 86 ntBASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Gm22713-201ENSMUST00000116895 130 ntBASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Mir1966-201ENSMUST00000158807 108 ntBASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Gm23365-201ENSMUST00000175019 125 ntBASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Gm25960-201ENSMUST00000175110 125 ntBASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Gm44453-201ENSMUST00000175161 126 ntBASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Gm25195-201ENSMUST00000177656 126 ntBASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Mir7667-201ENSMUST00000183866 63 ntBASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Mir6399-201ENSMUST00000184050 84 ntBASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Gm4644-201ENSMUST00000197587 400 ntBASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Gm43199-201ENSMUST00000200019 307 ntBASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Gm44182-201ENSMUST00000204052 115 ntBASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Gm18617-201ENSMUST00000222311 259 ntBASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.58□□□□□ -1.84
Ccdc9bA3KGF9 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc9bA3KGF9 Gm24376-201ENSMUST00000104399 127 ntBASIC3.57□□□□□ -1.84
Ccdc9bA3KGF9 Gm26249-201ENSMUST00000116708 118 ntBASIC3.57□□□□□ -1.84
Ccdc9bA3KGF9 Gm12351-201ENSMUST00000118727 292 ntBASIC3.57□□□□□ -1.84
Ccdc9bA3KGF9 Gm9119-201ENSMUST00000118866 495 ntBASIC3.57□□□□□ -1.84
Ccdc9bA3KGF9 Gm15497-201ENSMUST00000119137 551 ntBASIC3.57□□□□□ -1.84
Ccdc9bA3KGF9 Gm15377-201ENSMUST00000119594 246 ntBASIC3.57□□□□□ -1.84
Ccdc9bA3KGF9 Gm3788-201ENSMUST00000119949 136 ntBASIC3.57□□□□□ -1.84
Ccdc9bA3KGF9 Gm11281-201ENSMUST00000141391 576 ntBASIC3.57□□□□□ -1.84
Ccdc9bA3KGF9 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.57□□□□□ -1.84
Ccdc9bA3KGF9 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms