Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.54□□□□□ -2.16
Scn3aA2ASI5 Gm14417-201ENSMUST00000120036 1074 ntBASIC1.53□□□□□ -2.16
Scn3aA2ASI5 Snord13-201ENSMUST00000157627 104 ntBASIC1.53□□□□□ -2.16
Scn3aA2ASI5 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC1.53□□□□□ -2.16
Scn3aA2ASI5 Gm43284-201ENSMUST00000200103 253 ntBASIC1.53□□□□□ -2.16
Scn3aA2ASI5 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC1.53□□□□□ -2.16
Scn3aA2ASI5 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC1.53□□□□□ -2.16
Scn3aA2ASI5 Olfr197-201ENSMUST00000080031 926 ntBASIC1.53□□□□□ -2.16
Scn3aA2ASI5 Gm26166-201ENSMUST00000083788 107 ntBASIC1.53□□□□□ -2.16
Scn3aA2ASI5 Gm23040-201ENSMUST00000083869 163 ntBASIC1.53□□□□□ -2.16
Scn3aA2ASI5 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.53□□□□□ -2.16
Scn3aA2ASI5 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
Scn3aA2ASI5 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Mir343-201ENSMUST00000102360 75 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm14709-201ENSMUST00000121225 304 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm25325-201ENSMUST00000122559 86 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm24839-201ENSMUST00000122602 107 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm22603-201ENSMUST00000157603 96 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm27761-201ENSMUST00000184091 131 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm44830-201ENSMUST00000207667 584 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm45754-201ENSMUST00000212380 279 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm35558-203ENSMUST00000222264 204 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm11522-201ENSMUST00000120533 176 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm15281-201ENSMUST00000125181 351 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm25625-201ENSMUST00000157221 96 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm23760-201ENSMUST00000158350 116 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm25368-201ENSMUST00000158847 131 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm25162-201ENSMUST00000158906 159 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Mir3968-201ENSMUST00000175355 100 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm6660-201ENSMUST00000179149 468 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Mir7j-201ENSMUST00000184427 122 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm37029-201ENSMUST00000195773 239 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm43911-201ENSMUST00000203097 76 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm29809-201ENSMUST00000218423 493 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm9318-201ENSMUST00000222444 438 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 CT025689.4-201ENSMUST00000225926 601 ntBASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.52□□□□□ -2.17
Scn3aA2ASI5 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.52□□□□□ -2.17
Scn3aA2ASI5 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.51□□□□□ -2.17
Scn3aA2ASI5 Gm25876-201ENSMUST00000104329 119 ntBASIC1.51□□□□□ -2.17
Scn3aA2ASI5 Gm14013-201ENSMUST00000119006 270 ntBASIC1.51□□□□□ -2.17
Scn3aA2ASI5 Gm14748-201ENSMUST00000119819 411 ntBASIC1.51□□□□□ -2.17
Scn3aA2ASI5 Gm13602-201ENSMUST00000122405 493 ntBASIC1.51□□□□□ -2.17
Scn3aA2ASI5 Gm24379-201ENSMUST00000122695 86 ntBASIC1.51□□□□□ -2.17
Scn3aA2ASI5 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.51□□□□□ -2.17
Scn3aA2ASI5 Gm23718-201ENSMUST00000157350 307 ntBASIC1.51□□□□□ -2.17
Scn3aA2ASI5 Gm25454-201ENSMUST00000157947 315 ntBASIC1.51□□□□□ -2.17
Scn3aA2ASI5 Gm27313-201ENSMUST00000183500 142 ntBASIC1.51□□□□□ -2.17
Scn3aA2ASI5 Gm38333-201ENSMUST00000193608 604 ntBASIC1.51□□□□□ -2.17
Scn3aA2ASI5 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Scn3aA2ASI5 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Scn3aA2ASI5 Mir93-201ENSMUST00000083593 88 ntBASIC1.51□□□□□ -2.17
Scn3aA2ASI5 Gm25896-201ENSMUST00000083713 136 ntBASIC1.51□□□□□ -2.17
Scn3aA2ASI5 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Gm6954-201ENSMUST00000117416 225 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Gm14899-201ENSMUST00000118673 548 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Gm11358-201ENSMUST00000122310 373 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Gm23429-201ENSMUST00000122486 149 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Gm23025-201ENSMUST00000158769 111 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Gm44923-201ENSMUST00000206673 85 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Gm45375-201ENSMUST00000210338 280 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Gm8940-201ENSMUST00000212585 219 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Scn3aA2ASI5 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Gm25586-201ENSMUST00000082499 112 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Gm23097-201ENSMUST00000083448 105 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Mir687-201ENSMUST00000102166 89 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Gm7164-201ENSMUST00000117503 450 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Gm22963-201ENSMUST00000157960 91 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Gm21978-201ENSMUST00000179696 377 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Gm27894-201ENSMUST00000184177 92 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Gm44825-201ENSMUST00000207557 150 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Gm44598-201ENSMUST00000207566 150 ntBASIC1.5□□□□□ -2.17
Scn3aA2ASI5 Gm26384-201ENSMUST00000102183 110 ntBASIC1.49□□□□□ -2.17
Scn3aA2ASI5 Gm24582-201ENSMUST00000103967 103 ntBASIC1.49□□□□□ -2.17
Scn3aA2ASI5 Gm14551-201ENSMUST00000120802 256 ntBASIC1.49□□□□□ -2.17
Scn3aA2ASI5 Gm14766-201ENSMUST00000121689 367 ntBASIC1.49□□□□□ -2.17
Scn3aA2ASI5 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Scn3aA2ASI5 Gm22668-201ENSMUST00000158716 260 ntBASIC1.49□□□□□ -2.17
Scn3aA2ASI5 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.49□□□□□ -2.17
Scn3aA2ASI5 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Scn3aA2ASI5 Gm22631-201ENSMUST00000179656 94 ntBASIC1.49□□□□□ -2.17
Scn3aA2ASI5 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Scn3aA2ASI5 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC1.49□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 127.8 ms