Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC1.56□□□□□ -2.16
Scn1aA2APX8 Gm29352-201ENSMUST00000188054 544 ntBASIC1.56□□□□□ -2.16
Scn1aA2APX8 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
Scn1aA2APX8 Gm37658-201ENSMUST00000192672 315 ntBASIC1.56□□□□□ -2.16
Scn1aA2APX8 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.56□□□□□ -2.16
Scn1aA2APX8 Gm43284-201ENSMUST00000200103 253 ntBASIC1.56□□□□□ -2.16
Scn1aA2APX8 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.56□□□□□ -2.16
Scn1aA2APX8 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.56□□□□□ -2.16
Scn1aA2APX8 AC129208.2-201ENSMUST00000228506 320 ntBASIC1.56□□□□□ -2.16
Scn1aA2APX8 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.56□□□□□ -2.16
Scn1aA2APX8 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
Scn1aA2APX8 Gm23422-201ENSMUST00000102000 107 ntBASIC1.56□□□□□ -2.16
Scn1aA2APX8 Gm25559-201ENSMUST00000157182 74 ntBASIC1.56□□□□□ -2.16
Scn1aA2APX8 Gm23122-201ENSMUST00000157645 103 ntBASIC1.56□□□□□ -2.16
Scn1aA2APX8 Gm24846-201ENSMUST00000158033 108 ntBASIC1.56□□□□□ -2.16
Scn1aA2APX8 Gm27326-201ENSMUST00000183504 95 ntBASIC1.56□□□□□ -2.16
Scn1aA2APX8 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.56□□□□□ -2.16
Scn1aA2APX8 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.56□□□□□ -2.16
Scn1aA2APX8 Gm5034-201ENSMUST00000199115 634 ntBASIC1.56□□□□□ -2.16
Scn1aA2APX8 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.56□□□□□ -2.16
Scn1aA2APX8 AC153141.1-201ENSMUST00000218636 501 ntBASIC1.56□□□□□ -2.16
Scn1aA2APX8 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.56□□□□□ -2.16
Scn1aA2APX8 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Scn1aA2APX8 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Scn1aA2APX8 Snord38a-201ENSMUST00000083746 71 ntBASIC1.56□□□□□ -2.16
Scn1aA2APX8 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
Scn1aA2APX8 Gm38162-201ENSMUST00000195562 4597 ntBASIC1.55□□□□□ -2.16
Scn1aA2APX8 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Scn1aA2APX8 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Scn1aA2APX8 Gm13806-201ENSMUST00000117822 325 ntBASIC1.55□□□□□ -2.16
Scn1aA2APX8 Gm12779-201ENSMUST00000121496 143 ntBASIC1.55□□□□□ -2.16
Scn1aA2APX8 Gm14629-201ENSMUST00000122428 144 ntBASIC1.55□□□□□ -2.16
Scn1aA2APX8 Gm20543-201ENSMUST00000174200 726 ntBASIC1.55□□□□□ -2.16
Scn1aA2APX8 Gm24418-201ENSMUST00000177597 79 ntBASIC1.55□□□□□ -2.16
Scn1aA2APX8 Gm24639-201ENSMUST00000178518 79 ntBASIC1.55□□□□□ -2.16
Scn1aA2APX8 Gm23076-201ENSMUST00000179082 79 ntBASIC1.55□□□□□ -2.16
Scn1aA2APX8 Gm25077-201ENSMUST00000179157 79 ntBASIC1.55□□□□□ -2.16
Scn1aA2APX8 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC1.55□□□□□ -2.16
Scn1aA2APX8 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.55□□□□□ -2.16
Scn1aA2APX8 Gm43487-201ENSMUST00000200331 1031 ntBASIC1.55□□□□□ -2.16
Scn1aA2APX8 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.55□□□□□ -2.16
Scn1aA2APX8 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.55□□□□□ -2.16
Scn1aA2APX8 Mir124a-3-201ENSMUST00000083520 68 ntBASIC1.55□□□□□ -2.16
Scn1aA2APX8 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Scn1aA2APX8 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.55□□□□□ -2.16
Scn1aA2APX8 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm24084-201ENSMUST00000175173 137 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm23725-201ENSMUST00000177876 107 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm37557-201ENSMUST00000191640 139 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.54□□□□□ -2.16
Scn1aA2APX8 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm45791-201ENSMUST00000212908 352 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Scn1aA2APX8 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm26166-201ENSMUST00000083788 107 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm22709-201ENSMUST00000116893 111 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm6954-201ENSMUST00000117416 225 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm8858-201ENSMUST00000118259 342 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm12550-201ENSMUST00000118478 329 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm12053-201ENSMUST00000119022 252 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm15497-201ENSMUST00000119137 551 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 AA413626-201ENSMUST00000121125 494 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm14402-201ENSMUST00000122217 508 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm24076-201ENSMUST00000158179 94 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm26004-201ENSMUST00000158804 116 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm22166-201ENSMUST00000178419 121 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm23288-201ENSMUST00000179213 121 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm38395-201ENSMUST00000199904 830 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.54□□□□□ -2.16
Scn1aA2APX8 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm26446-201ENSMUST00000082455 103 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Gm25636-201ENSMUST00000082666 133 ntBASIC1.54□□□□□ -2.16
Scn1aA2APX8 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Scn1aA2APX8 Gm14013-201ENSMUST00000119006 270 ntBASIC1.53□□□□□ -2.16
Scn1aA2APX8 Gm25325-201ENSMUST00000122559 86 ntBASIC1.53□□□□□ -2.16
Scn1aA2APX8 Gm22382-201ENSMUST00000158185 130 ntBASIC1.53□□□□□ -2.16
Scn1aA2APX8 Gm23022-201ENSMUST00000158768 180 ntBASIC1.53□□□□□ -2.16
Scn1aA2APX8 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Scn1aA2APX8 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Scn1aA2APX8 Gm28151-201ENSMUST00000189404 951 ntBASIC1.53□□□□□ -2.16
Scn1aA2APX8 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.53□□□□□ -2.16
Scn1aA2APX8 Gm44910-201ENSMUST00000208451 396 ntBASIC1.53□□□□□ -2.16
Scn1aA2APX8 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Scn1aA2APX8 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Scn1aA2APX8 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
Scn1aA2APX8 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Scn1aA2APX8 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.52□□□□□ -2.17
Scn1aA2APX8 Gm23202-201ENSMUST00000104376 129 ntBASIC1.52□□□□□ -2.17
Scn1aA2APX8 Gm14670-201ENSMUST00000117327 337 ntBASIC1.52□□□□□ -2.17
Scn1aA2APX8 Gm13457-201ENSMUST00000117885 267 ntBASIC1.52□□□□□ -2.17
Scn1aA2APX8 Gm12235-201ENSMUST00000118596 170 ntBASIC1.52□□□□□ -2.17
Scn1aA2APX8 Gm11556-201ENSMUST00000120751 288 ntBASIC1.52□□□□□ -2.17
Scn1aA2APX8 Gm14551-201ENSMUST00000120802 256 ntBASIC1.52□□□□□ -2.17
Scn1aA2APX8 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 134.2 ms