Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb3S4R1G7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
H2afb3S4R1G7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2afb3S4R1G7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
H2afb3S4R1G7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
H2afb3S4R1G7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
H2afb3S4R1G7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
H2afb3S4R1G7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
H2afb3S4R1G7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb3S4R1G7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb3S4R1G7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb3S4R1G7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
H2afb3S4R1G7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
H2afb3S4R1G7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
H2afb3S4R1G7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.33■□□□□ 0.04
H2afb3S4R1G7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.33■□□□□ 0.04
H2afb3S4R1G7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb3S4R1G7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb3S4R1G7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
H2afb3S4R1G7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
H2afb3S4R1G7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb3S4R1G7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb3S4R1G7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb3S4R1G7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb3S4R1G7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
H2afb3S4R1G7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb3S4R1G7 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.32■□□□□ 0.04
H2afb3S4R1G7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
H2afb3S4R1G7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb3S4R1G7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
H2afb3S4R1G7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb3S4R1G7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.32■□□□□ 0.04
H2afb3S4R1G7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb3S4R1G7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
H2afb3S4R1G7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.32■□□□□ 0.04
H2afb3S4R1G7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb3S4R1G7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
H2afb3S4R1G7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb3S4R1G7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
H2afb3S4R1G7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb3S4R1G7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb3S4R1G7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb3S4R1G7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb3S4R1G7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb3S4R1G7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.32■□□□□ 0.04
H2afb3S4R1G7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb3S4R1G7 Gm15039-201ENSMUST00000118914 875 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms