Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl40Q9Z2Q5 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl40Q9Z2Q5 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl40Q9Z2Q5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.07■□□□□ 0.32
Mrpl40Q9Z2Q5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl40Q9Z2Q5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl40Q9Z2Q5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.06■□□□□ 0.32
Mrpl40Q9Z2Q5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl40Q9Z2Q5 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl40Q9Z2Q5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl40Q9Z2Q5 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl40Q9Z2Q5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl40Q9Z2Q5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl40Q9Z2Q5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl40Q9Z2Q5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl40Q9Z2Q5 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.06■□□□□ 0.32
Mrpl40Q9Z2Q5 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl40Q9Z2Q5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl40Q9Z2Q5 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.06■□□□□ 0.32
Mrpl40Q9Z2Q5 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl40Q9Z2Q5 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Mrpl40Q9Z2Q5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl40Q9Z2Q5 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl40Q9Z2Q5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Mrpl40Q9Z2Q5 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.04■□□□□ 0.32
Mrpl40Q9Z2Q5 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrpl40Q9Z2Q5 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.04■□□□□ 0.32
Mrpl40Q9Z2Q5 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.04■□□□□ 0.32
Mrpl40Q9Z2Q5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrpl40Q9Z2Q5 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Mrpl40Q9Z2Q5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrpl40Q9Z2Q5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Mrpl40Q9Z2Q5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrpl40Q9Z2Q5 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrpl40Q9Z2Q5 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrpl40Q9Z2Q5 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrpl40Q9Z2Q5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl40Q9Z2Q5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl40Q9Z2Q5 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.03■□□□□ 0.32
Mrpl40Q9Z2Q5 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl40Q9Z2Q5 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.03■□□□□ 0.32
Mrpl40Q9Z2Q5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl40Q9Z2Q5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl40Q9Z2Q5 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl40Q9Z2Q5 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl40Q9Z2Q5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Mrpl40Q9Z2Q5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl40Q9Z2Q5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl40Q9Z2Q5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl40Q9Z2Q5 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl40Q9Z2Q5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl40Q9Z2Q5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl40Q9Z2Q5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl40Q9Z2Q5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl40Q9Z2Q5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl40Q9Z2Q5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mrpl40Q9Z2Q5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mrpl40Q9Z2Q5 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Mrpl40Q9Z2Q5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mrpl40Q9Z2Q5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mrpl40Q9Z2Q5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mrpl40Q9Z2Q5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mrpl40Q9Z2Q5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mrpl40Q9Z2Q5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Mrpl40Q9Z2Q5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mrpl40Q9Z2Q5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mrpl40Q9Z2Q5 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Mrpl40Q9Z2Q5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Mrpl40Q9Z2Q5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mrpl40Q9Z2Q5 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Mrpl40Q9Z2Q5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Mrpl40Q9Z2Q5 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mrpl40Q9Z2Q5 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.01■□□□□ 0.31
Mrpl40Q9Z2Q5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mrpl40Q9Z2Q5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mrpl40Q9Z2Q5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Mrpl40Q9Z2Q5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms