Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 Gm13148-201ENSMUST00000118892 745 ntBASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Crlf3Q9Z2L7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Gm7290-201ENSMUST00000104990 617 ntBASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Gm12918-201ENSMUST00000120234 636 ntBASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Gm15710-201ENSMUST00000121821 636 ntBASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Gm5075-201ENSMUST00000196916 622 ntBASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Crlf3Q9Z2L7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Crlf3Q9Z2L7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Crlf3Q9Z2L7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Crlf3Q9Z2L7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Crlf3Q9Z2L7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Crlf3Q9Z2L7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.24■□□□□ 0.35
Crlf3Q9Z2L7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Crlf3Q9Z2L7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.24■□□□□ 0.35
Crlf3Q9Z2L7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.24■□□□□ 0.35
Crlf3Q9Z2L7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Crlf3Q9Z2L7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Crlf3Q9Z2L7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Crlf3Q9Z2L7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Crlf3Q9Z2L7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Crlf3Q9Z2L7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Gm12441-201ENSMUST00000121806 588 ntBASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Crlf3Q9Z2L7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Crlf3Q9Z2L7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Crlf3Q9Z2L7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Crlf3Q9Z2L7 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Crlf3Q9Z2L7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Crlf3Q9Z2L7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Crlf3Q9Z2L7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Crlf3Q9Z2L7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Crlf3Q9Z2L7 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.22■□□□□ 0.35
Crlf3Q9Z2L7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Crlf3Q9Z2L7 Gm2399-201ENSMUST00000104944 225 ntBASIC17.22■□□□□ 0.35
Crlf3Q9Z2L7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Crlf3Q9Z2L7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Crlf3Q9Z2L7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Crlf3Q9Z2L7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Crlf3Q9Z2L7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Crlf3Q9Z2L7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms