Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.84■□□□□ 0.77
Clip2Q9Z0H8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.84■□□□□ 0.77
Clip2Q9Z0H8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clip2Q9Z0H8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clip2Q9Z0H8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clip2Q9Z0H8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Clip2Q9Z0H8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Clip2Q9Z0H8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clip2Q9Z0H8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clip2Q9Z0H8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.83■□□□□ 0.77
Clip2Q9Z0H8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clip2Q9Z0H8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.83■□□□□ 0.77
Clip2Q9Z0H8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Clip2Q9Z0H8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Clip2Q9Z0H8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clip2Q9Z0H8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clip2Q9Z0H8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clip2Q9Z0H8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clip2Q9Z0H8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Clip2Q9Z0H8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.82■□□□□ 0.76
Clip2Q9Z0H8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Clip2Q9Z0H8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip2Q9Z0H8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip2Q9Z0H8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Clip2Q9Z0H8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Clip2Q9Z0H8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Clip2Q9Z0H8 AA414768-201ENSMUST00000121924 1257 ntBASIC19.82■□□□□ 0.76
Clip2Q9Z0H8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.82■□□□□ 0.76
Clip2Q9Z0H8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clip2Q9Z0H8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Clip2Q9Z0H8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clip2Q9Z0H8 Gm27000-201ENSMUST00000182943 842 ntBASIC19.82■□□□□ 0.76
Clip2Q9Z0H8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Clip2Q9Z0H8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Clip2Q9Z0H8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.82■□□□□ 0.76
Clip2Q9Z0H8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip2Q9Z0H8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip2Q9Z0H8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clip2Q9Z0H8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clip2Q9Z0H8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip2Q9Z0H8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip2Q9Z0H8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clip2Q9Z0H8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Clip2Q9Z0H8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clip2Q9Z0H8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Clip2Q9Z0H8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.81■□□□□ 0.76
Clip2Q9Z0H8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.81■□□□□ 0.76
Clip2Q9Z0H8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip2Q9Z0H8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip2Q9Z0H8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip2Q9Z0H8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip2Q9Z0H8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clip2Q9Z0H8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Clip2Q9Z0H8 Actl10-202ENSMUST00000226583 1501 ntBASIC19.81■□□□□ 0.76
Clip2Q9Z0H8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Clip2Q9Z0H8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip2Q9Z0H8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip2Q9Z0H8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip2Q9Z0H8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip2Q9Z0H8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip2Q9Z0H8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip2Q9Z0H8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip2Q9Z0H8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clip2Q9Z0H8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip2Q9Z0H8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.8■□□□□ 0.76
Clip2Q9Z0H8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clip2Q9Z0H8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clip2Q9Z0H8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Clip2Q9Z0H8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clip2Q9Z0H8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clip2Q9Z0H8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip2Q9Z0H8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip2Q9Z0H8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clip2Q9Z0H8 Gm26039-201ENSMUST00000158152 144 ntBASIC19.79■□□□□ 0.76
Clip2Q9Z0H8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.79■□□□□ 0.76
Clip2Q9Z0H8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip2Q9Z0H8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip2Q9Z0H8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip2Q9Z0H8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip2Q9Z0H8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip2Q9Z0H8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Clip2Q9Z0H8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip2Q9Z0H8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clip2Q9Z0H8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Clip2Q9Z0H8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip2Q9Z0H8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.78■□□□□ 0.76
Clip2Q9Z0H8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip2Q9Z0H8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip2Q9Z0H8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip2Q9Z0H8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip2Q9Z0H8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip2Q9Z0H8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip2Q9Z0H8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clip2Q9Z0H8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clip2Q9Z0H8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip2Q9Z0H8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip2Q9Z0H8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip2Q9Z0H8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip2Q9Z0H8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clip2Q9Z0H8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms