Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn5Q9WVD4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clcn5Q9WVD4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn5Q9WVD4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.63■□□□□ 0.41
Clcn5Q9WVD4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn5Q9WVD4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn5Q9WVD4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn5Q9WVD4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn5Q9WVD4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn5Q9WVD4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn5Q9WVD4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn5Q9WVD4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn5Q9WVD4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.63■□□□□ 0.41
Clcn5Q9WVD4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Clcn5Q9WVD4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn5Q9WVD4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn5Q9WVD4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clcn5Q9WVD4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn5Q9WVD4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn5Q9WVD4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn5Q9WVD4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Clcn5Q9WVD4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn5Q9WVD4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Clcn5Q9WVD4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn5Q9WVD4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn5Q9WVD4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.61■□□□□ 0.41
Clcn5Q9WVD4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn5Q9WVD4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn5Q9WVD4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn5Q9WVD4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn5Q9WVD4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn5Q9WVD4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Clcn5Q9WVD4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn5Q9WVD4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn5Q9WVD4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn5Q9WVD4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn5Q9WVD4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
Clcn5Q9WVD4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Clcn5Q9WVD4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn5Q9WVD4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.6■□□□□ 0.41
Clcn5Q9WVD4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.6■□□□□ 0.41
Clcn5Q9WVD4 Gm27742-201ENSMUST00000184667 60 ntBASIC17.6■□□□□ 0.41
Clcn5Q9WVD4 Gm28659-201ENSMUST00000188013 759 ntBASIC17.6■□□□□ 0.41
Clcn5Q9WVD4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn5Q9WVD4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.6■□□□□ 0.41
Clcn5Q9WVD4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn5Q9WVD4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn5Q9WVD4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn5Q9WVD4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn5Q9WVD4 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.6■□□□□ 0.41
Clcn5Q9WVD4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Gm7213-201ENSMUST00000215977 950 ntBASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn5Q9WVD4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clcn5Q9WVD4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clcn5Q9WVD4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn5Q9WVD4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.58■□□□□ 0.4
Clcn5Q9WVD4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms