Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn8aQ9WTU3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn8aQ9WTU3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn8aQ9WTU3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn8aQ9WTU3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.18■□□□□ 0.34
Scn8aQ9WTU3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn8aQ9WTU3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Scn8aQ9WTU3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn8aQ9WTU3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.18■□□□□ 0.34
Scn8aQ9WTU3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scn8aQ9WTU3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.18■□□□□ 0.34
Scn8aQ9WTU3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.18■□□□□ 0.34
Scn8aQ9WTU3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn8aQ9WTU3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn8aQ9WTU3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn8aQ9WTU3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn8aQ9WTU3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn8aQ9WTU3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
Scn8aQ9WTU3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn8aQ9WTU3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.16■□□□□ 0.34
Scn8aQ9WTU3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn8aQ9WTU3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn8aQ9WTU3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
Scn8aQ9WTU3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn8aQ9WTU3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn8aQ9WTU3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.16■□□□□ 0.34
Scn8aQ9WTU3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Scn8aQ9WTU3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn8aQ9WTU3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Scn8aQ9WTU3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn8aQ9WTU3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn8aQ9WTU3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Scn8aQ9WTU3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Scn8aQ9WTU3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Scn8aQ9WTU3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Scn8aQ9WTU3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Scn8aQ9WTU3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scn8aQ9WTU3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scn8aQ9WTU3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Scn8aQ9WTU3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Scn8aQ9WTU3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn8aQ9WTU3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Scn8aQ9WTU3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.14■□□□□ 0.33
Scn8aQ9WTU3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn8aQ9WTU3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn8aQ9WTU3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn8aQ9WTU3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scn8aQ9WTU3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn8aQ9WTU3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn8aQ9WTU3 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.14■□□□□ 0.33
Scn8aQ9WTU3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Scn8aQ9WTU3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms