Protein–RNA interactions for Protein: Q9WTN3

Srebf1, Sterol regulatory element-binding protein 1, mousemouse

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srebf1Q9WTN3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srebf1Q9WTN3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srebf1Q9WTN3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.47■□□□□ 0.23
Srebf1Q9WTN3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srebf1Q9WTN3 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.47■□□□□ 0.23
Srebf1Q9WTN3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Srebf1Q9WTN3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Gm9731-201ENSMUST00000209480 747 ntBASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Il3ra-202ENSMUST00000223589 738 ntBASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Srebf1Q9WTN3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Srebf1Q9WTN3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.46■□□□□ 0.22
Srebf1Q9WTN3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Srebf1Q9WTN3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Srebf1Q9WTN3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Srebf1Q9WTN3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 Gm27704-201ENSMUST00000185094 107 ntBASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.44■□□□□ 0.22
Srebf1Q9WTN3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srebf1Q9WTN3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srebf1Q9WTN3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srebf1Q9WTN3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Srebf1Q9WTN3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.43■□□□□ 0.22
Srebf1Q9WTN3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srebf1Q9WTN3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srebf1Q9WTN3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.43■□□□□ 0.22
Srebf1Q9WTN3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.43■□□□□ 0.22
Srebf1Q9WTN3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srebf1Q9WTN3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srebf1Q9WTN3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Srebf1Q9WTN3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srebf1Q9WTN3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srebf1Q9WTN3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srebf1Q9WTN3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Srebf1Q9WTN3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 134.2 ms