Protein–RNA interactions for Protein: Q9R1A9

Trex2, Three prime repair exonuclease 2, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex2Q9R1A9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trex2Q9R1A9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.37□□□□□ -0.11
Trex2Q9R1A9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trex2Q9R1A9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Gm5643-201ENSMUST00000117081 966 ntBASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Gm15378-201ENSMUST00000121894 207 ntBASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Gm12382-201ENSMUST00000122005 922 ntBASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trex2Q9R1A9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Gm18025-201ENSMUST00000221733 862 ntBASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trex2Q9R1A9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trex2Q9R1A9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trex2Q9R1A9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trex2Q9R1A9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trex2Q9R1A9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trex2Q9R1A9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trex2Q9R1A9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trex2Q9R1A9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trex2Q9R1A9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms