Protein–RNA interactions for Protein: Q9R0A5

Nek3, Serine/threonine-protein kinase Nek3, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek3Q9R0A5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nek3Q9R0A5 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nek3Q9R0A5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nek3Q9R0A5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nek3Q9R0A5 Gm24841-201ENSMUST00000158676 357 ntBASIC18.67■□□□□ 0.58
Nek3Q9R0A5 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nek3Q9R0A5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nek3Q9R0A5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nek3Q9R0A5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nek3Q9R0A5 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.67■□□□□ 0.58
Nek3Q9R0A5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Nek3Q9R0A5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nek3Q9R0A5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nek3Q9R0A5 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nek3Q9R0A5 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nek3Q9R0A5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Gm13158-201ENSMUST00000122007 736 ntBASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Gm37292-201ENSMUST00000192062 758 ntBASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nek3Q9R0A5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nek3Q9R0A5 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nek3Q9R0A5 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.64■□□□□ 0.58
Nek3Q9R0A5 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nek3Q9R0A5 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Nek3Q9R0A5 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nek3Q9R0A5 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nek3Q9R0A5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nek3Q9R0A5 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nek3Q9R0A5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nek3Q9R0A5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nek3Q9R0A5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nek3Q9R0A5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.64■□□□□ 0.57
Nek3Q9R0A5 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nek3Q9R0A5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nek3Q9R0A5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nek3Q9R0A5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nek3Q9R0A5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.64■□□□□ 0.57
Nek3Q9R0A5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nek3Q9R0A5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Nek3Q9R0A5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nek3Q9R0A5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms