Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Phtf1Q9QZ09 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Phtf1Q9QZ09 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Phtf1Q9QZ09 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Phtf1Q9QZ09 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Phtf1Q9QZ09 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Phtf1Q9QZ09 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
Phtf1Q9QZ09 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.72■□□□□ 0.59
Phtf1Q9QZ09 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.72■□□□□ 0.59
Phtf1Q9QZ09 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Phtf1Q9QZ09 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Phtf1Q9QZ09 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Phtf1Q9QZ09 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Phtf1Q9QZ09 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Phtf1Q9QZ09 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Phtf1Q9QZ09 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Phtf1Q9QZ09 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Phtf1Q9QZ09 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Gm18032-201ENSMUST00000222541 538 ntBASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Gm10566-201ENSMUST00000086739 996 ntBASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Phtf1Q9QZ09 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.71■□□□□ 0.58
Phtf1Q9QZ09 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Phtf1Q9QZ09 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Phtf1Q9QZ09 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Phtf1Q9QZ09 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Phtf1Q9QZ09 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
Phtf1Q9QZ09 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Phtf1Q9QZ09 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Phtf1Q9QZ09 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Phtf1Q9QZ09 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 Gm13474-201ENSMUST00000122466 815 ntBASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Phtf1Q9QZ09 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 Gm18958-201ENSMUST00000174258 762 ntBASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Phtf1Q9QZ09 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Phtf1Q9QZ09 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
Phtf1Q9QZ09 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Phtf1Q9QZ09 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.67■□□□□ 0.58
Phtf1Q9QZ09 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Phtf1Q9QZ09 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms