Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.29■□□□□ 0.68
Nr2e3Q9QXZ7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.29■□□□□ 0.68
Nr2e3Q9QXZ7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nr2e3Q9QXZ7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr2e3Q9QXZ7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr2e3Q9QXZ7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr2e3Q9QXZ7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nr2e3Q9QXZ7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr2e3Q9QXZ7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr2e3Q9QXZ7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr2e3Q9QXZ7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr2e3Q9QXZ7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr2e3Q9QXZ7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr2e3Q9QXZ7 Gm18958-201ENSMUST00000174258 762 ntBASIC19.27■□□□□ 0.68
Nr2e3Q9QXZ7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.27■□□□□ 0.68
Nr2e3Q9QXZ7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.27■□□□□ 0.68
Nr2e3Q9QXZ7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr2e3Q9QXZ7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr2e3Q9QXZ7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Nr2e3Q9QXZ7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nr2e3Q9QXZ7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.27■□□□□ 0.67
Nr2e3Q9QXZ7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nr2e3Q9QXZ7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nr2e3Q9QXZ7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nr2e3Q9QXZ7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 Gm18959-201ENSMUST00000208954 655 ntBASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nr2e3Q9QXZ7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Nr2e3Q9QXZ7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Nr2e3Q9QXZ7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr2e3Q9QXZ7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr2e3Q9QXZ7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.25■□□□□ 0.67
Nr2e3Q9QXZ7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr2e3Q9QXZ7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr2e3Q9QXZ7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nr2e3Q9QXZ7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr2e3Q9QXZ7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nr2e3Q9QXZ7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nr2e3Q9QXZ7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
Nr2e3Q9QXZ7 Gm16061-201ENSMUST00000122167 857 ntBASIC19.25■□□□□ 0.67
Nr2e3Q9QXZ7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Nr2e3Q9QXZ7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr2e3Q9QXZ7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nr2e3Q9QXZ7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nr2e3Q9QXZ7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr2e3Q9QXZ7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Nr2e3Q9QXZ7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Nr2e3Q9QXZ7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nr2e3Q9QXZ7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.24■□□□□ 0.67
Nr2e3Q9QXZ7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nr2e3Q9QXZ7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Nr2e3Q9QXZ7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.24■□□□□ 0.67
Nr2e3Q9QXZ7 Mir5130-201ENSMUST00000175160 84 ntBASIC19.24■□□□□ 0.67
Nr2e3Q9QXZ7 Gm45058-201ENSMUST00000205810 766 ntBASIC19.24■□□□□ 0.67
Nr2e3Q9QXZ7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.24■□□□□ 0.67
Nr2e3Q9QXZ7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nr2e3Q9QXZ7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.24■□□□□ 0.67
Nr2e3Q9QXZ7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nr2e3Q9QXZ7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms