Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Shroom3Q9QXN0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shroom3Q9QXN0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Shroom3Q9QXN0 Gm27463-201ENSMUST00000183569 57 ntBASIC17.08■□□□□ 0.33
Shroom3Q9QXN0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.08■□□□□ 0.33
Shroom3Q9QXN0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shroom3Q9QXN0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Shroom3Q9QXN0 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.08■□□□□ 0.33
Shroom3Q9QXN0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shroom3Q9QXN0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Shroom3Q9QXN0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Shroom3Q9QXN0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Shroom3Q9QXN0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shroom3Q9QXN0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shroom3Q9QXN0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Shroom3Q9QXN0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shroom3Q9QXN0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Shroom3Q9QXN0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Shroom3Q9QXN0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shroom3Q9QXN0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Shroom3Q9QXN0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shroom3Q9QXN0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shroom3Q9QXN0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Shroom3Q9QXN0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom3Q9QXN0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Shroom3Q9QXN0 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.07■□□□□ 0.32
Shroom3Q9QXN0 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.07■□□□□ 0.32
Shroom3Q9QXN0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom3Q9QXN0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom3Q9QXN0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom3Q9QXN0 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.07■□□□□ 0.32
Shroom3Q9QXN0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom3Q9QXN0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.07■□□□□ 0.32
Shroom3Q9QXN0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom3Q9QXN0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Shroom3Q9QXN0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom3Q9QXN0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom3Q9QXN0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Shroom3Q9QXN0 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.06■□□□□ 0.32
Shroom3Q9QXN0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom3Q9QXN0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom3Q9QXN0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom3Q9QXN0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom3Q9QXN0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.06■□□□□ 0.32
Shroom3Q9QXN0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom3Q9QXN0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom3Q9QXN0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom3Q9QXN0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom3Q9QXN0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom3Q9QXN0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Shroom3Q9QXN0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.06■□□□□ 0.32
Shroom3Q9QXN0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.06■□□□□ 0.32
Shroom3Q9QXN0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Shroom3Q9QXN0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom3Q9QXN0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom3Q9QXN0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Shroom3Q9QXN0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Shroom3Q9QXN0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom3Q9QXN0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom3Q9QXN0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom3Q9QXN0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom3Q9QXN0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom3Q9QXN0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.05■□□□□ 0.32
Shroom3Q9QXN0 Gm18101-201ENSMUST00000215769 548 ntBASIC17.05■□□□□ 0.32
Shroom3Q9QXN0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom3Q9QXN0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom3Q9QXN0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shroom3Q9QXN0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom3Q9QXN0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom3Q9QXN0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom3Q9QXN0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom3Q9QXN0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.04■□□□□ 0.32
Shroom3Q9QXN0 Gm7791-201ENSMUST00000219066 539 ntBASIC17.04■□□□□ 0.32
Shroom3Q9QXN0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom3Q9QXN0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom3Q9QXN0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom3Q9QXN0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom3Q9QXN0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom3Q9QXN0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom3Q9QXN0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom3Q9QXN0 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.04■□□□□ 0.32
Shroom3Q9QXN0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom3Q9QXN0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom3Q9QXN0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Shroom3Q9QXN0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shroom3Q9QXN0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom3Q9QXN0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom3Q9QXN0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom3Q9QXN0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.03■□□□□ 0.32
Shroom3Q9QXN0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom3Q9QXN0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom3Q9QXN0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom3Q9QXN0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom3Q9QXN0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom3Q9QXN0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom3Q9QXN0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom3Q9QXN0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom3Q9QXN0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shroom3Q9QXN0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.03■□□□□ 0.32
Shroom3Q9QXN0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms