Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Copb1Q9JIF7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.68■□□□□ 0.58
Copb1Q9JIF7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Copb1Q9JIF7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Copb1Q9JIF7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.68■□□□□ 0.58
Copb1Q9JIF7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Copb1Q9JIF7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.68■□□□□ 0.58
Copb1Q9JIF7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Copb1Q9JIF7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Copb1Q9JIF7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb1Q9JIF7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Gm10517-202ENSMUST00000192970 758 ntBASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Gm20049-201ENSMUST00000219950 730 ntBASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb1Q9JIF7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Copb1Q9JIF7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Copb1Q9JIF7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Copb1Q9JIF7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Copb1Q9JIF7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Copb1Q9JIF7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Copb1Q9JIF7 Gm12382-201ENSMUST00000122005 922 ntBASIC18.66■□□□□ 0.58
Copb1Q9JIF7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.66■□□□□ 0.58
Copb1Q9JIF7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Copb1Q9JIF7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Copb1Q9JIF7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Copb1Q9JIF7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Copb1Q9JIF7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Copb1Q9JIF7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Copb1Q9JIF7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Copb1Q9JIF7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Copb1Q9JIF7 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.66■□□□□ 0.58
Copb1Q9JIF7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Copb1Q9JIF7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Copb1Q9JIF7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Copb1Q9JIF7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Copb1Q9JIF7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.65■□□□□ 0.58
Copb1Q9JIF7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Copb1Q9JIF7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Copb1Q9JIF7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Copb1Q9JIF7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Copb1Q9JIF7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Copb1Q9JIF7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.65■□□□□ 0.58
Copb1Q9JIF7 Gm24841-201ENSMUST00000158676 357 ntBASIC18.65■□□□□ 0.58
Copb1Q9JIF7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Copb1Q9JIF7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Copb1Q9JIF7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Copb1Q9JIF7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Copb1Q9JIF7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Copb1Q9JIF7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Copb1Q9JIF7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Copb1Q9JIF7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Copb1Q9JIF7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.64■□□□□ 0.57
Copb1Q9JIF7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Copb1Q9JIF7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Copb1Q9JIF7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Copb1Q9JIF7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Copb1Q9JIF7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Copb1Q9JIF7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Copb1Q9JIF7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Copb1Q9JIF7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.64■□□□□ 0.57
Copb1Q9JIF7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Copb1Q9JIF7 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Copb1Q9JIF7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Copb1Q9JIF7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Copb1Q9JIF7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Copb1Q9JIF7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Copb1Q9JIF7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Copb1Q9JIF7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Copb1Q9JIF7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Copb1Q9JIF7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Copb1Q9JIF7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Copb1Q9JIF7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.63■□□□□ 0.57
Copb1Q9JIF7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Copb1Q9JIF7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.63■□□□□ 0.57
Copb1Q9JIF7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.63■□□□□ 0.57
Copb1Q9JIF7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Copb1Q9JIF7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Copb1Q9JIF7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Copb1Q9JIF7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Copb1Q9JIF7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms