Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim54Q9ERP3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim54Q9ERP3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim54Q9ERP3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim54Q9ERP3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim54Q9ERP3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim54Q9ERP3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim54Q9ERP3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.46■□□□□ 0.55
Trim54Q9ERP3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim54Q9ERP3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim54Q9ERP3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim54Q9ERP3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim54Q9ERP3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim54Q9ERP3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Trim54Q9ERP3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim54Q9ERP3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim54Q9ERP3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim54Q9ERP3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim54Q9ERP3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim54Q9ERP3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim54Q9ERP3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim54Q9ERP3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trim54Q9ERP3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim54Q9ERP3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.45■□□□□ 0.54
Trim54Q9ERP3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim54Q9ERP3 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.45■□□□□ 0.54
Trim54Q9ERP3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim54Q9ERP3 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.45■□□□□ 0.54
Trim54Q9ERP3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim54Q9ERP3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.45■□□□□ 0.54
Trim54Q9ERP3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trim54Q9ERP3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim54Q9ERP3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim54Q9ERP3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim54Q9ERP3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trim54Q9ERP3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.44■□□□□ 0.54
Trim54Q9ERP3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim54Q9ERP3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim54Q9ERP3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Trim54Q9ERP3 Gm11950-201ENSMUST00000121615 838 ntBASIC18.44■□□□□ 0.54
Trim54Q9ERP3 Gm6623-201ENSMUST00000173570 544 ntBASIC18.44■□□□□ 0.54
Trim54Q9ERP3 Gm37722-201ENSMUST00000193757 208 ntBASIC18.44■□□□□ 0.54
Trim54Q9ERP3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim54Q9ERP3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim54Q9ERP3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim54Q9ERP3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim54Q9ERP3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim54Q9ERP3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim54Q9ERP3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim54Q9ERP3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim54Q9ERP3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim54Q9ERP3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim54Q9ERP3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.43■□□□□ 0.54
Trim54Q9ERP3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim54Q9ERP3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim54Q9ERP3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim54Q9ERP3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trim54Q9ERP3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim54Q9ERP3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim54Q9ERP3 Mir770-201ENSMUST00000103252 94 ntBASIC18.43■□□□□ 0.54
Trim54Q9ERP3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.43■□□□□ 0.54
Trim54Q9ERP3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim54Q9ERP3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.43■□□□□ 0.54
Trim54Q9ERP3 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.43■□□□□ 0.54
Trim54Q9ERP3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.43■□□□□ 0.54
Trim54Q9ERP3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Trim54Q9ERP3 Gm17807-201ENSMUST00000186869 298 ntBASIC18.43■□□□□ 0.54
Trim54Q9ERP3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim54Q9ERP3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim54Q9ERP3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim54Q9ERP3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim54Q9ERP3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim54Q9ERP3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trim54Q9ERP3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim54Q9ERP3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim54Q9ERP3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim54Q9ERP3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim54Q9ERP3 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.42■□□□□ 0.54
Trim54Q9ERP3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim54Q9ERP3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.42■□□□□ 0.54
Trim54Q9ERP3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim54Q9ERP3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim54Q9ERP3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim54Q9ERP3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim54Q9ERP3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trim54Q9ERP3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim54Q9ERP3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim54Q9ERP3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim54Q9ERP3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim54Q9ERP3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trim54Q9ERP3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim54Q9ERP3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.41■□□□□ 0.54
Trim54Q9ERP3 Gm28033-201ENSMUST00000184224 96 ntBASIC18.41■□□□□ 0.54
Trim54Q9ERP3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim54Q9ERP3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim54Q9ERP3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trim54Q9ERP3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim54Q9ERP3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim54Q9ERP3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim54Q9ERP3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms