Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.42■□□□□ 0.7
Upf1Q9EPU0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Upf1Q9EPU0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.41■□□□□ 0.7
Upf1Q9EPU0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Upf1Q9EPU0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Upf1Q9EPU0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Upf1Q9EPU0 Gm14127-201ENSMUST00000117906 678 ntBASIC19.41■□□□□ 0.7
Upf1Q9EPU0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Upf1Q9EPU0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.41■□□□□ 0.7
Upf1Q9EPU0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC19.41■□□□□ 0.7
Upf1Q9EPU0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Upf1Q9EPU0 Gm44450-201ENSMUST00000199528 114 ntBASIC19.41■□□□□ 0.7
Upf1Q9EPU0 Gm44945-201ENSMUST00000206764 1187 ntBASIC19.41■□□□□ 0.7
Upf1Q9EPU0 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.41■□□□□ 0.7
Upf1Q9EPU0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Upf1Q9EPU0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Upf1Q9EPU0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Upf1Q9EPU0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upf1Q9EPU0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upf1Q9EPU0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.4■□□□□ 0.7
Upf1Q9EPU0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Upf1Q9EPU0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upf1Q9EPU0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Upf1Q9EPU0 Gm17271-201ENSMUST00000165535 355 ntBASIC19.4■□□□□ 0.7
Upf1Q9EPU0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upf1Q9EPU0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Upf1Q9EPU0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upf1Q9EPU0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC19.4■□□□□ 0.7
Upf1Q9EPU0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.4■□□□□ 0.7
Upf1Q9EPU0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upf1Q9EPU0 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upf1Q9EPU0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upf1Q9EPU0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Upf1Q9EPU0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upf1Q9EPU0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Upf1Q9EPU0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upf1Q9EPU0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Upf1Q9EPU0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Upf1Q9EPU0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upf1Q9EPU0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Upf1Q9EPU0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Upf1Q9EPU0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upf1Q9EPU0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Upf1Q9EPU0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upf1Q9EPU0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upf1Q9EPU0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upf1Q9EPU0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upf1Q9EPU0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upf1Q9EPU0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upf1Q9EPU0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Upf1Q9EPU0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upf1Q9EPU0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upf1Q9EPU0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Upf1Q9EPU0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.38■□□□□ 0.69
Upf1Q9EPU0 Gm44430-201ENSMUST00000203376 995 ntBASIC19.38■□□□□ 0.69
Upf1Q9EPU0 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.38■□□□□ 0.69
Upf1Q9EPU0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC19.38■□□□□ 0.69
Upf1Q9EPU0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upf1Q9EPU0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upf1Q9EPU0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upf1Q9EPU0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upf1Q9EPU0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.38■□□□□ 0.69
Upf1Q9EPU0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19.37■□□□□ 0.69
Upf1Q9EPU0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Gm18421-201ENSMUST00000204122 625 ntBASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Upf1Q9EPU0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upf1Q9EPU0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC19.36■□□□□ 0.69
Upf1Q9EPU0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC19.36■□□□□ 0.69
Upf1Q9EPU0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Upf1Q9EPU0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC19.36■□□□□ 0.69
Upf1Q9EPU0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Upf1Q9EPU0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upf1Q9EPU0 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.36■□□□□ 0.69
Upf1Q9EPU0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upf1Q9EPU0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upf1Q9EPU0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Upf1Q9EPU0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upf1Q9EPU0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.35■□□□□ 0.69
Upf1Q9EPU0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Upf1Q9EPU0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upf1Q9EPU0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms