Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rrp8Q9DB85 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Gm28659-201ENSMUST00000188013 759 ntBASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rrp8Q9DB85 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rrp8Q9DB85 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rrp8Q9DB85 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rrp8Q9DB85 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rrp8Q9DB85 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rrp8Q9DB85 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.68■□□□□ 0.26
Rrp8Q9DB85 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rrp8Q9DB85 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rrp8Q9DB85 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rrp8Q9DB85 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rrp8Q9DB85 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rrp8Q9DB85 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rrp8Q9DB85 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rrp8Q9DB85 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rrp8Q9DB85 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rrp8Q9DB85 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rrp8Q9DB85 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rrp8Q9DB85 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rrp8Q9DB85 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.67■□□□□ 0.26
Rrp8Q9DB85 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rrp8Q9DB85 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rrp8Q9DB85 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rrp8Q9DB85 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rrp8Q9DB85 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rrp8Q9DB85 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.67■□□□□ 0.26
Rrp8Q9DB85 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rrp8Q9DB85 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp8Q9DB85 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rrp8Q9DB85 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp8Q9DB85 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp8Q9DB85 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rrp8Q9DB85 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rrp8Q9DB85 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp8Q9DB85 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp8Q9DB85 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.66■□□□□ 0.26
Rrp8Q9DB85 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rrp8Q9DB85 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp8Q9DB85 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp8Q9DB85 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp8Q9DB85 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp8Q9DB85 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp8Q9DB85 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rrp8Q9DB85 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rrp8Q9DB85 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp8Q9DB85 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp8Q9DB85 Gm11336-201ENSMUST00000118168 334 ntBASIC16.65■□□□□ 0.26
Rrp8Q9DB85 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.65■□□□□ 0.26
Rrp8Q9DB85 Gm34391-201ENSMUST00000203706 907 ntBASIC16.65■□□□□ 0.26
Rrp8Q9DB85 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.65■□□□□ 0.26
Rrp8Q9DB85 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.65■□□□□ 0.26
Rrp8Q9DB85 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp8Q9DB85 Birc2-201ENSMUST00000054878 378 ntBASIC16.65■□□□□ 0.26
Rrp8Q9DB85 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rrp8Q9DB85 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rrp8Q9DB85 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.65■□□□□ 0.26
Rrp8Q9DB85 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp8Q9DB85 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp8Q9DB85 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.65■□□□□ 0.26
Rrp8Q9DB85 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp8Q9DB85 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrp8Q9DB85 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Rrp8Q9DB85 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Rrp8Q9DB85 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rrp8Q9DB85 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrp8Q9DB85 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrp8Q9DB85 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rrp8Q9DB85 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrp8Q9DB85 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrp8Q9DB85 Gm15794-201ENSMUST00000120182 631 ntBASIC16.64■□□□□ 0.25
Rrp8Q9DB85 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rrp8Q9DB85 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rrp8Q9DB85 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
Rrp8Q9DB85 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.64■□□□□ 0.25
Rrp8Q9DB85 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms