Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc7Q9D541 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc7Q9D541 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc7Q9D541 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ccdc7Q9D541 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc7Q9D541 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc7Q9D541 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc7Q9D541 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc7Q9D541 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc7Q9D541 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.94■□□□□ 0.78
Ccdc7Q9D541 Gm9731-201ENSMUST00000209480 747 ntBASIC19.94■□□□□ 0.78
Ccdc7Q9D541 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc7Q9D541 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc7Q9D541 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc7Q9D541 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc7Q9D541 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc7Q9D541 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ccdc7Q9D541 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ccdc7Q9D541 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc7Q9D541 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ccdc7Q9D541 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc7Q9D541 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.93■□□□□ 0.78
Ccdc7Q9D541 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc7Q9D541 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.93■□□□□ 0.78
Ccdc7Q9D541 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.93■□□□□ 0.78
Ccdc7Q9D541 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc7Q9D541 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ccdc7Q9D541 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc7Q9D541 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc7Q9D541 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc7Q9D541 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.93■□□□□ 0.78
Ccdc7Q9D541 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc7Q9D541 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc7Q9D541 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Ccdc7Q9D541 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc7Q9D541 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc7Q9D541 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc7Q9D541 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.92■□□□□ 0.78
Ccdc7Q9D541 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc7Q9D541 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc7Q9D541 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc7Q9D541 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc7Q9D541 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc7Q9D541 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc7Q9D541 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ccdc7Q9D541 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc7Q9D541 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccdc7Q9D541 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Il3ra-202ENSMUST00000223589 738 ntBASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc7Q9D541 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc7Q9D541 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc7Q9D541 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc7Q9D541 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc7Q9D541 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc7Q9D541 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.9■□□□□ 0.78
Ccdc7Q9D541 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc7Q9D541 Gm38027-201ENSMUST00000192315 235 ntBASIC19.9■□□□□ 0.78
Ccdc7Q9D541 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.9■□□□□ 0.78
Ccdc7Q9D541 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc7Q9D541 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc7Q9D541 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc7Q9D541 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc7Q9D541 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc7Q9D541 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc7Q9D541 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc7Q9D541 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc7Q9D541 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc7Q9D541 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc7Q9D541 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc7Q9D541 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Ccdc7Q9D541 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ccdc7Q9D541 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.89■□□□□ 0.78
Ccdc7Q9D541 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ccdc7Q9D541 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ccdc7Q9D541 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ccdc7Q9D541 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Ccdc7Q9D541 Gm7638-201ENSMUST00000121348 967 ntBASIC19.89■□□□□ 0.77
Ccdc7Q9D541 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.89■□□□□ 0.77
Ccdc7Q9D541 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms