Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Stag1Q9D3E6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Stag1Q9D3E6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Stag1Q9D3E6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Stag1Q9D3E6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.3■□□□□ 0.84
Stag1Q9D3E6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Stag1Q9D3E6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Stag1Q9D3E6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stag1Q9D3E6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stag1Q9D3E6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Stag1Q9D3E6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.29■□□□□ 0.84
Stag1Q9D3E6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Stag1Q9D3E6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Stag1Q9D3E6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Stag1Q9D3E6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stag1Q9D3E6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stag1Q9D3E6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stag1Q9D3E6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stag1Q9D3E6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stag1Q9D3E6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Stag1Q9D3E6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Stag1Q9D3E6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Stag1Q9D3E6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stag1Q9D3E6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stag1Q9D3E6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Stag1Q9D3E6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stag1Q9D3E6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stag1Q9D3E6 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stag1Q9D3E6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.28■□□□□ 0.84
Stag1Q9D3E6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.28■□□□□ 0.84
Stag1Q9D3E6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stag1Q9D3E6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.28■□□□□ 0.84
Stag1Q9D3E6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stag1Q9D3E6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stag1Q9D3E6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Stag1Q9D3E6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stag1Q9D3E6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.28■□□□□ 0.84
Stag1Q9D3E6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.28■□□□□ 0.84
Stag1Q9D3E6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Stag1Q9D3E6 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.28■□□□□ 0.84
Stag1Q9D3E6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stag1Q9D3E6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stag1Q9D3E6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stag1Q9D3E6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.28■□□□□ 0.84
Stag1Q9D3E6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stag1Q9D3E6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stag1Q9D3E6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stag1Q9D3E6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stag1Q9D3E6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.27■□□□□ 0.84
Stag1Q9D3E6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stag1Q9D3E6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stag1Q9D3E6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stag1Q9D3E6 Mir3081-201ENSMUST00000175305 84 ntBASIC20.27■□□□□ 0.84
Stag1Q9D3E6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stag1Q9D3E6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stag1Q9D3E6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stag1Q9D3E6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stag1Q9D3E6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Stag1Q9D3E6 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Stag1Q9D3E6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Stag1Q9D3E6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Stag1Q9D3E6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stag1Q9D3E6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Stag1Q9D3E6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stag1Q9D3E6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Stag1Q9D3E6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.26■□□□□ 0.83
Stag1Q9D3E6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stag1Q9D3E6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stag1Q9D3E6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Stag1Q9D3E6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stag1Q9D3E6 Gm27357-201ENSMUST00000183754 135 ntBASIC20.26■□□□□ 0.83
Stag1Q9D3E6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Stag1Q9D3E6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Stag1Q9D3E6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Stag1Q9D3E6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stag1Q9D3E6 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.26■□□□□ 0.83
Stag1Q9D3E6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stag1Q9D3E6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Stag1Q9D3E6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stag1Q9D3E6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stag1Q9D3E6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Stag1Q9D3E6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Stag1Q9D3E6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stag1Q9D3E6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stag1Q9D3E6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Stag1Q9D3E6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stag1Q9D3E6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stag1Q9D3E6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Stag1Q9D3E6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Stag1Q9D3E6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stag1Q9D3E6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stag1Q9D3E6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stag1Q9D3E6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Stag1Q9D3E6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Stag1Q9D3E6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stag1Q9D3E6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stag1Q9D3E6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stag1Q9D3E6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.25■□□□□ 0.83
Stag1Q9D3E6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stag1Q9D3E6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms