Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc43Q9CR29 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc43Q9CR29 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.98■□□□□ 0.63
Ccdc43Q9CR29 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc43Q9CR29 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc43Q9CR29 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc43Q9CR29 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.98■□□□□ 0.63
Ccdc43Q9CR29 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.98■□□□□ 0.63
Ccdc43Q9CR29 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc43Q9CR29 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc43Q9CR29 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc43Q9CR29 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc43Q9CR29 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc43Q9CR29 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.98■□□□□ 0.63
Ccdc43Q9CR29 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc43Q9CR29 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.97■□□□□ 0.63
Ccdc43Q9CR29 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Ccdc43Q9CR29 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc43Q9CR29 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc43Q9CR29 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ccdc43Q9CR29 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc43Q9CR29 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc43Q9CR29 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.97■□□□□ 0.63
Ccdc43Q9CR29 Mir8112-201ENSMUST00000184382 131 ntBASIC18.97■□□□□ 0.63
Ccdc43Q9CR29 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.97■□□□□ 0.63
Ccdc43Q9CR29 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.97■□□□□ 0.63
Ccdc43Q9CR29 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc43Q9CR29 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc43Q9CR29 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc43Q9CR29 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc43Q9CR29 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc43Q9CR29 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc43Q9CR29 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ccdc43Q9CR29 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc43Q9CR29 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc43Q9CR29 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc43Q9CR29 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc43Q9CR29 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc43Q9CR29 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.96■□□□□ 0.63
Ccdc43Q9CR29 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc43Q9CR29 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.96■□□□□ 0.63
Ccdc43Q9CR29 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc43Q9CR29 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc43Q9CR29 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc43Q9CR29 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc43Q9CR29 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc43Q9CR29 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc43Q9CR29 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc43Q9CR29 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc43Q9CR29 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc43Q9CR29 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc43Q9CR29 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ccdc43Q9CR29 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc43Q9CR29 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc43Q9CR29 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc43Q9CR29 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc43Q9CR29 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc43Q9CR29 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc43Q9CR29 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ccdc43Q9CR29 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc43Q9CR29 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ccdc43Q9CR29 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc43Q9CR29 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.94■□□□□ 0.62
Ccdc43Q9CR29 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc43Q9CR29 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc43Q9CR29 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc43Q9CR29 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.94■□□□□ 0.62
Ccdc43Q9CR29 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.94■□□□□ 0.62
Ccdc43Q9CR29 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Ccdc43Q9CR29 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc43Q9CR29 Gm15378-201ENSMUST00000121894 207 ntBASIC18.94■□□□□ 0.62
Ccdc43Q9CR29 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc43Q9CR29 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.94■□□□□ 0.62
Ccdc43Q9CR29 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc43Q9CR29 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc43Q9CR29 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc43Q9CR29 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.94■□□□□ 0.62
Ccdc43Q9CR29 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc43Q9CR29 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc43Q9CR29 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc43Q9CR29 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.93■□□□□ 0.62
Ccdc43Q9CR29 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc43Q9CR29 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc43Q9CR29 Gm5643-201ENSMUST00000117081 966 ntBASIC18.93■□□□□ 0.62
Ccdc43Q9CR29 Gm13168-201ENSMUST00000121771 632 ntBASIC18.93■□□□□ 0.62
Ccdc43Q9CR29 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc43Q9CR29 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc43Q9CR29 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc43Q9CR29 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc43Q9CR29 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.92■□□□□ 0.62
Ccdc43Q9CR29 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms