Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim33Q99PP7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim33Q99PP7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim33Q99PP7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim33Q99PP7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.9■□□□□ 0.3
Trim33Q99PP7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim33Q99PP7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim33Q99PP7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.9■□□□□ 0.3
Trim33Q99PP7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.9■□□□□ 0.3
Trim33Q99PP7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.9■□□□□ 0.3
Trim33Q99PP7 Gm10252-201ENSMUST00000209541 832 ntBASIC16.9■□□□□ 0.3
Trim33Q99PP7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.9■□□□□ 0.3
Trim33Q99PP7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim33Q99PP7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trim33Q99PP7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim33Q99PP7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim33Q99PP7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim33Q99PP7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim33Q99PP7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trim33Q99PP7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim33Q99PP7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim33Q99PP7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim33Q99PP7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim33Q99PP7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim33Q99PP7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim33Q99PP7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trim33Q99PP7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim33Q99PP7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim33Q99PP7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim33Q99PP7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trim33Q99PP7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trim33Q99PP7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.89■□□□□ 0.29
Trim33Q99PP7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim33Q99PP7 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim33Q99PP7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.89■□□□□ 0.29
Trim33Q99PP7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim33Q99PP7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim33Q99PP7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim33Q99PP7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim33Q99PP7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim33Q99PP7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim33Q99PP7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim33Q99PP7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Gm21814-202ENSMUST00000203277 873 ntBASIC16.88■□□□□ 0.29
Trim33Q99PP7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.88■□□□□ 0.29
Trim33Q99PP7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.88■□□□□ 0.29
Trim33Q99PP7 Odf3b-204ENSMUST00000227834 930 ntBASIC16.88■□□□□ 0.29
Trim33Q99PP7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim33Q99PP7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim33Q99PP7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim33Q99PP7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim33Q99PP7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim33Q99PP7 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.87■□□□□ 0.29
Trim33Q99PP7 Gm3375-201ENSMUST00000203929 796 ntBASIC16.87■□□□□ 0.29
Trim33Q99PP7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim33Q99PP7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim33Q99PP7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trim33Q99PP7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim33Q99PP7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.87■□□□□ 0.29
Trim33Q99PP7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim33Q99PP7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim33Q99PP7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
Trim33Q99PP7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim33Q99PP7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim33Q99PP7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Trim33Q99PP7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim33Q99PP7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim33Q99PP7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trim33Q99PP7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim33Q99PP7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim33Q99PP7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim33Q99PP7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim33Q99PP7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim33Q99PP7 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.86■□□□□ 0.29
Trim33Q99PP7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim33Q99PP7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim33Q99PP7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim33Q99PP7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim33Q99PP7 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.86■□□□□ 0.29
Trim33Q99PP7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim33Q99PP7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms