Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Pcdh15Q99PJ1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Gm15590-201ENSMUST00000078419 552 ntBASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Gm4535-201ENSMUST00000182274 558 ntBASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Gm10355-201ENSMUST00000097146 517 ntBASIC19.37■□□□□ 0.69
Pcdh15Q99PJ1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.36■□□□□ 0.69
Pcdh15Q99PJ1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh15Q99PJ1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh15Q99PJ1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh15Q99PJ1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh15Q99PJ1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh15Q99PJ1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh15Q99PJ1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh15Q99PJ1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh15Q99PJ1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh15Q99PJ1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Pcdh15Q99PJ1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh15Q99PJ1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh15Q99PJ1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdh15Q99PJ1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdh15Q99PJ1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh15Q99PJ1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh15Q99PJ1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pcdh15Q99PJ1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh15Q99PJ1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdh15Q99PJ1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh15Q99PJ1 AC084391.1-201ENSMUST00000200651 141 ntBASIC19.35■□□□□ 0.69
Pcdh15Q99PJ1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh15Q99PJ1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdh15Q99PJ1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdh15Q99PJ1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pcdh15Q99PJ1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh15Q99PJ1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh15Q99PJ1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh15Q99PJ1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh15Q99PJ1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.34■□□□□ 0.69
Pcdh15Q99PJ1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.34■□□□□ 0.69
Pcdh15Q99PJ1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh15Q99PJ1 AC225888.1-201ENSMUST00000227184 728 ntBASIC19.34■□□□□ 0.69
Pcdh15Q99PJ1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pcdh15Q99PJ1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh15Q99PJ1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh15Q99PJ1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdh15Q99PJ1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.34■□□□□ 0.69
Pcdh15Q99PJ1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh15Q99PJ1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Pcdh15Q99PJ1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh15Q99PJ1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pcdh15Q99PJ1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh15Q99PJ1 Gm13418-201ENSMUST00000119097 944 ntBASIC19.33■□□□□ 0.69
Pcdh15Q99PJ1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.33■□□□□ 0.69
Pcdh15Q99PJ1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.33■□□□□ 0.69
Pcdh15Q99PJ1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC19.33■□□□□ 0.69
Pcdh15Q99PJ1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.33■□□□□ 0.69
Pcdh15Q99PJ1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh15Q99PJ1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.33■□□□□ 0.69
Pcdh15Q99PJ1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh15Q99PJ1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh15Q99PJ1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Pcdh15Q99PJ1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Pcdh15Q99PJ1 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC19.33■□□□□ 0.68
Pcdh15Q99PJ1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh15Q99PJ1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh15Q99PJ1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh15Q99PJ1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh15Q99PJ1 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.33■□□□□ 0.68
Pcdh15Q99PJ1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh15Q99PJ1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh15Q99PJ1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh15Q99PJ1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh15Q99PJ1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh15Q99PJ1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh15Q99PJ1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh15Q99PJ1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh15Q99PJ1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdh15Q99PJ1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.32■□□□□ 0.68
Pcdh15Q99PJ1 Gm27397-201ENSMUST00000184997 107 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms