Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.4■□□□□ 0.38
Cdh23Q99PF4 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh23Q99PF4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.4■□□□□ 0.38
Cdh23Q99PF4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cdh23Q99PF4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh23Q99PF4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh23Q99PF4 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.4■□□□□ 0.38
Cdh23Q99PF4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh23Q99PF4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh23Q99PF4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh23Q99PF4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.4■□□□□ 0.38
Cdh23Q99PF4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Cdh23Q99PF4 Gm15165-201ENSMUST00000118140 502 ntBASIC17.4■□□□□ 0.38
Cdh23Q99PF4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh23Q99PF4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh23Q99PF4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh23Q99PF4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cdh23Q99PF4 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Gm11336-201ENSMUST00000118168 334 ntBASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Gm15920-201ENSMUST00000118998 402 ntBASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cdh23Q99PF4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh23Q99PF4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh23Q99PF4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh23Q99PF4 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh23Q99PF4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh23Q99PF4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Cdh23Q99PF4 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.38■□□□□ 0.37
Cdh23Q99PF4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh23Q99PF4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh23Q99PF4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh23Q99PF4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cdh23Q99PF4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh23Q99PF4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.38■□□□□ 0.37
Cdh23Q99PF4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh23Q99PF4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cdh23Q99PF4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cdh23Q99PF4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Cdh23Q99PF4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Cdh23Q99PF4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cdh23Q99PF4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh23Q99PF4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh23Q99PF4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh23Q99PF4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh23Q99PF4 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.37■□□□□ 0.37
Cdh23Q99PF4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh23Q99PF4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh23Q99PF4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh23Q99PF4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh23Q99PF4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cdh23Q99PF4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh23Q99PF4 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.37■□□□□ 0.37
Cdh23Q99PF4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.37■□□□□ 0.37
Cdh23Q99PF4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.37■□□□□ 0.37
Cdh23Q99PF4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh23Q99PF4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh23Q99PF4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cdh23Q99PF4 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.36■□□□□ 0.37
Cdh23Q99PF4 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.36■□□□□ 0.37
Cdh23Q99PF4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh23Q99PF4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cdh23Q99PF4 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh23Q99PF4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh23Q99PF4 Gm29791-202ENSMUST00000207888 369 ntBASIC17.36■□□□□ 0.37
Cdh23Q99PF4 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.36■□□□□ 0.37
Cdh23Q99PF4 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.36■□□□□ 0.37
Cdh23Q99PF4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh23Q99PF4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh23Q99PF4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh23Q99PF4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh23Q99PF4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cdh23Q99PF4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdh23Q99PF4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh23Q99PF4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh23Q99PF4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh23Q99PF4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh23Q99PF4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh23Q99PF4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Cdh23Q99PF4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdh23Q99PF4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms